Gene
RNA
| Item | Value |
|---|---|
| gene id | G593224 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28949005 ~ 29041967 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU676231 | True | 210 | lncRNA | 0.41 | 2 | 28949005 | 29041967 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527622 | LOC106564406 | coding | upstream | 27608 | 28912640 ~ 28921397 (+) |
| LOC110527611 | rbm45 | coding | upstream | 168820 | 28754476 ~ 28780185 (+) |
| mtx2 | mtx2 | coding | upstream | 262212 | 28666416 ~ 28686793 (+) |
| LOC110527602 | LOC105007064 | coding | upstream | 580975 | 28306267 ~ 28368030 (+) |
| LOC118965275 | LOC106575153 | coding | upstream | 690563 | 28221625 ~ 28258442 (+) |
| LOC110527621 | NA | coding | downstream | 45144 | 29087111 ~ 29099411 (+) |
| LOC110527619 | LOC106578599 | coding | downstream | 287617 | 29329584 ~ 29503787 (+) |
| LOC118965283 | NA | coding | downstream | 347650 | 29389617 ~ 29396184 (+) |
| LOC118965282 | NA | coding | downstream | 371903 | 29413870 ~ 29442670 (+) |
| LOC110527623 | NA | coding | downstream | 521842 | 29563350 ~ 29636769 (+) |
| G593170 | LOC107661334 | non-coding | upstream | 56934 | 28891822 ~ 28892071 (+) |
| G593163 | NA | non-coding | upstream | 71956 | 28876643 ~ 28877049 (+) |
| G593160 | NA | non-coding | upstream | 73968 | 28874696 ~ 28875037 (+) |
| G593158 | NA | non-coding | upstream | 76852 | 28871909 ~ 28872153 (+) |
| G593155 | NA | non-coding | upstream | 86371 | 28862365 ~ 28862634 (+) |
| G593274 | NA | non-coding | downstream | 2478 | 29044445 ~ 29059575 (+) |
| G593291 | NA | non-coding | downstream | 38624 | 29080591 ~ 29080798 (+) |
| G593295 | NA | non-coding | downstream | 42237 | 29084204 ~ 29084530 (+) |
| G593307 | NA | non-coding | downstream | 62268 | 29104235 ~ 29105025 (+) |
| G593317 | NA | non-coding | downstream | 73939 | 29115906 ~ 29116723 (+) |
| G593171 | NA | other | upstream | 56580 | 28892163 ~ 28892425 (+) |
| G593144 | NA | other | upstream | 107922 | 28835209 ~ 28841083 (+) |
| plekha3 | LOC106575131 | other | upstream | 1074584 | 27854006 ~ 27874521 (+) |
| G592445 | lig4 | other | upstream | 1241711 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 1465209 | 27483050 ~ 27483796 (+) |
| G593283 | NA | other | downstream | 17731 | 29059698 ~ 29064592 (+) |
| G593513 | LOC106610831 | other | downstream | 486060 | 29528027 ~ 29528910 (+) |
| G593774 | LOC106593940 | other | downstream | 989992 | 30031959 ~ 30032621 (+) |
| G596168 | NA | other | downstream | 1861212 | 30903179 ~ 30903887 (+) |
