G593188


Basic Information

Item Value
gene id G593188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28979901 ~ 28980194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676191
agattagagaacacattgggtgggatcttagaccattcctccatacagaatctctcCAGGTCCTTGATTTATTTTGTCTGCTCAAACCACAAGTTTTCAATGGAGTTCAAGTCcgaagactgagatggccattgaaaATGTTCATTGTGTgcccaattaaccatttctttgtggatgttgatgtgtCTTGTTGGAAGATCCACTtatggccaagtttcagcctcctagcAGAGAGGAAACCAGGTTTTGGGTTAAAATATCATGGTAGTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676191 True 271 lncRNA 0.42 2 28979901 28980194

Neighbor

gene id symbol gene type direction distance location
LOC118965279 LOC106595049 coding upstream 2288 28975483 ~ 28977613 (+)
LOC110527622 LOC106564406 coding upstream 58504 28912640 ~ 28921397 (+)
LOC110527611 rbm45 coding upstream 199716 28754476 ~ 28780185 (+)
mtx2 mtx2 coding upstream 293108 28666416 ~ 28686793 (+)
LOC110527602 LOC105007064 coding upstream 611871 28306267 ~ 28368030 (+)
LOC118965280 NA coding downstream 7152 28987346 ~ 28992237 (+)
LOC110527630 NA coding downstream 30784 29010978 ~ 29013251 (+)
LOC110527620 NA coding downstream 46137 29026331 ~ 29035347 (+)
LOC110527621 NA coding downstream 106917 29087111 ~ 29099411 (+)
LOC110527619 LOC106578599 coding downstream 349390 29329584 ~ 29503787 (+)
G593228 NA non-coding upstream 25030 28954088 ~ 28954871 (+)
G593170 LOC107661334 non-coding upstream 87830 28891822 ~ 28892071 (+)
G593163 NA non-coding upstream 102852 28876643 ~ 28877049 (+)
G593160 NA non-coding upstream 104864 28874696 ~ 28875037 (+)
G593158 NA non-coding upstream 107748 28871909 ~ 28872153 (+)
G593260 LOC106593246 non-coding downstream 39466 29019660 ~ 29024943 (+)
G593274 NA non-coding downstream 64251 29044445 ~ 29059575 (+)
G593291 NA non-coding downstream 100397 29080591 ~ 29080798 (+)
G593295 NA non-coding downstream 104010 29084204 ~ 29084530 (+)
G593171 NA other upstream 87476 28892163 ~ 28892425 (+)
G593144 NA other upstream 138818 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1105480 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1272607 27703583 ~ 27707294 (+)
G592134 NA other upstream 1496105 27483050 ~ 27483796 (+)
G593283 NA other downstream 79504 29059698 ~ 29064592 (+)
G593513 LOC106610831 other downstream 547833 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 1051765 30031959 ~ 30032621 (+)
G596168 NA other downstream 1922985 30903179 ~ 30903887 (+)

Expression


Co-expression Network