G593291


Basic Information

Item Value
gene id G593291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29080591 ~ 29080798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676305
TTctgtgcccatgaaaactgttttcccAGCGTAATATAAGGAGACACTAAATGTTACGTAGTTCGAGTGCATTTCAGAGATCTGAATACAAAAAAACTGTCCGACAGCAAGATCCAGTATTTAAGTTGAAGTTCATCATATAACAAGCTtaacgttatgactataactactgttccctgaaggagggaaactcGGTACAATATACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676305 True 208 lncRNA 0.37 1 29080591 29080798

Neighbor

gene id symbol gene type direction distance location
LOC110527620 NA coding upstream 45985 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 67340 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 88354 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 102978 28975483 ~ 28977613 (+)
LOC110527622 LOC106564406 coding upstream 159194 28912640 ~ 28921397 (+)
LOC110527621 NA coding downstream 6313 29087111 ~ 29099411 (+)
LOC110527619 LOC106578599 coding downstream 248786 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 308819 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 333072 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 483011 29563350 ~ 29636769 (+)
G593274 NA non-coding upstream 21016 29044445 ~ 29059575 (+)
G593224 NA non-coding upstream 38624 28949005 ~ 29041967 (+)
G593260 LOC106593246 non-coding upstream 55648 29019660 ~ 29024943 (+)
G593188 NA non-coding upstream 100397 28979901 ~ 28980194 (+)
G593295 NA non-coding downstream 3406 29084204 ~ 29084530 (+)
G593307 NA non-coding downstream 23437 29104235 ~ 29105025 (+)
G593317 NA non-coding downstream 35108 29115906 ~ 29116723 (+)
G593322 NA non-coding downstream 52199 29132997 ~ 29133869 (+)
G593323 NA non-coding downstream 53565 29134363 ~ 29134915 (+)
G593283 NA other upstream 15999 29059698 ~ 29064592 (+)
G593171 NA other upstream 188166 28892163 ~ 28892425 (+)
G593144 NA other upstream 239508 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1206170 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1373297 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 447229 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 951161 30031959 ~ 30032621 (+)
G596168 NA other downstream 1822381 30903179 ~ 30903887 (+)
G596297 NA other downstream 2000923 31081721 ~ 31082290 (+)

Expression


Co-expression Network