G593317


Basic Information

Item Value
gene id G593317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29115906 ~ 29116723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676335
TTTTGCAACATGTTCAAATCAAGTTTTATTTATAGAGCACATTTCAGACACGGAAGCAACACAATGGCTTCACAGGAAATAACAATAAAcagaaatatttactacacaaacAGAGGATAAAAAACAGAAGAATAACAACTGAAAGACTAATGAGCATTAAGGAAATGCCATTGATTAAAATATTAATTGGATGCAACATCCAACCCAAAACATAAACTTGTTTTACTACATTGTTtgttgttacgttccccagcagGAAAACCAGAAATGTCAAATAGAAAAAGGAATTAAAGAatcactgacaacaaccacaACTAAACAGGTGGGGTTTTAGGATGGCTCTGAAAGACACTACGGGGGTGTCCAATGGaagttgactagtaacaacaactgggacctaaaagacacccaccatgagacccactaaacctgcccaagaagaggcaaacaaaagaaaaaccaacaccaaccaccaaactggaagtcttctgactagcttggaaagacagtactgtgcagtaccgaagagcccttactgctgctcgatcatcctatttttctaacttaattgaggaaaataagaacaatccgaaattcctttttgatactgtcgcaaagctaactaaaaagcagcattccccaagagaggatgactttcactttagcagtgataaattcatgaacttctttgaggaaaatattatgattattagaaagcaaattacggactcctccttaaatctgcatattccttcaaagctcagttgtcctgagtctgcacaactctgccaggacctaggatcaagagagacgctcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676335 True 818 lncRNA 0.38 1 29115906 29116723

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 16495 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 81300 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 102655 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 123669 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 138293 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 212861 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 272894 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 297147 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 447086 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 569693 29686416 ~ 29703056 (+)
G593307 NA non-coding upstream 10881 29104235 ~ 29105025 (+)
G593295 NA non-coding upstream 31376 29084204 ~ 29084530 (+)
G593291 NA non-coding upstream 35108 29080591 ~ 29080798 (+)
G593274 NA non-coding upstream 56331 29044445 ~ 29059575 (+)
G593322 NA non-coding downstream 16274 29132997 ~ 29133869 (+)
G593323 NA non-coding downstream 17640 29134363 ~ 29134915 (+)
G593324 NA non-coding downstream 31849 29148572 ~ 29150344 (+)
G593329 NA non-coding downstream 37363 29154086 ~ 29154404 (+)
G593330 NA non-coding downstream 44472 29161195 ~ 29161697 (+)
G593283 NA other upstream 51314 29059698 ~ 29064592 (+)
G593171 NA other upstream 223481 28892163 ~ 28892425 (+)
G593144 NA other upstream 274823 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1241485 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1408612 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 411304 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 915236 30031959 ~ 30032621 (+)
G596168 NA other downstream 1786456 30903179 ~ 30903887 (+)
G596297 NA other downstream 1964998 31081721 ~ 31082290 (+)

Expression


Co-expression Network