G593324


Basic Information

Item Value
gene id G593324
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29148572 ~ 29150344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676347
ACTGTGACATTGGGGATATCCCACCTAGAAAAATGTTGTTGAAAATAAAACTATGCCCGACGTACAATATAAGCTTGGTTTTAGTTGAAAAGAAAACTATTTAATTTCAACGTACTTGCAGCTTATACACATGGACACAGTATAATAAATCGGTCTATAATCGATTTTATTAACAATCCTAATAAGTTGAgtcataaatataaaatatatatttgttgtcCTAAGGGGAAGGTGTTACAttctttggtttttccatttatattttgaggttggactttagctCGTTAGCATGTAGGATGCattgattggtgtcacctcgttagtcagtatgtggtccatctcgttagtgggaaggtgtttcacctgagctggtccaggttctatttaaaacctgttgaatctagggggcactattttcatttttggaaaaagaatgttcccaaagtaaacgggctattttgtcaggacaaaatgctagaatatgcatataattgacagattgggatagaaaacactctaaagtttccaaaactgtacaaatattgtctgtgagtataacataactgatattgcaggcaaaagcctgagaaaaatccaatcaggaagctctgcgttcctatgcgtccctattgagcagtgaatgagatatcgACTAGattgtctagtgtcacaatacatagtttcaggcttttattttgaaaaatgagcctaaacgtcaacattgcgtcagtggtcagctgtagtctctcagagtgttttgtgcgtaagagacaaatgcggccattgtttctctctttccagAAGCcatctgtcccggttgatatattatcgaatagatatttgaaaaacaccttgaggattgattataaacaacgtttgccatgtttctgtcgatattatggagctaatttggaatatttttcggcgttgtcgtgaccgcaattttcggtcgaattctcagctgagatgacagggtgattaacaaaaggctaagctgtgttttaatatagttcacttgtgatttcatgaatataaatattttctcgtaatatttatgtccgttgtgttatgctaattagtgtcagttgatgattacgctcccagatccgggatgggtagttacaaGAGGATTtattaagagtgtctggcccagtgctccagttgtcttgatagatgtggagagtctCCACCTTTTTGGTTTCGTCCTGTCTTTAAGTTTTGTTTTCCACTTCTTGAGAagatttagtgggtctcatggtgggtgtctttcaggtcccagttgttgttactagtcaacttCCAGTGCCTCTCCTAAAAAACAAGTGTATATTTTGGGTTGGAAATTGCATCCAATTAATATTTTAATCAATGGTATTTCCTTAGAAAGTTCATTAGTCTTTCAGTTGTTAGTCTTCTGTTTGTTGTGTACtaaatatttgttgttgttttttttctgtgaagccattctgttgcatccatgtctgaaatATGCCGTATAAATGAATGACCAATCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676347 True 1515 lncRNA 0.37 2 29148572 29150344

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 49161 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 113966 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 135321 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 156335 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 170959 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 179240 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 239273 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 263526 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 413465 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 536072 29686416 ~ 29703056 (+)
G593323 NA non-coding upstream 13657 29134363 ~ 29134915 (+)
G593322 NA non-coding upstream 14703 29132997 ~ 29133869 (+)
G593317 NA non-coding upstream 31849 29115906 ~ 29116723 (+)
G593307 NA non-coding upstream 43547 29104235 ~ 29105025 (+)
G593295 NA non-coding upstream 64042 29084204 ~ 29084530 (+)
G593329 NA non-coding downstream 3742 29154086 ~ 29154404 (+)
G593330 NA non-coding downstream 10851 29161195 ~ 29161697 (+)
G593334 NA non-coding downstream 18891 29169235 ~ 29173452 (+)
G593335 NA non-coding downstream 20010 29170354 ~ 29171707 (+)
G593336 NA non-coding downstream 24067 29174411 ~ 29181625 (+)
G593283 NA other upstream 83980 29059698 ~ 29064592 (+)
G593171 NA other upstream 256147 28892163 ~ 28892425 (+)
G593144 NA other upstream 307489 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1274151 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1441278 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 377683 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 881615 30031959 ~ 30032621 (+)
G596168 NA other downstream 1752835 30903179 ~ 30903887 (+)
G596297 NA other downstream 1931377 31081721 ~ 31082290 (+)

Expression


Co-expression Network