G593334


Basic Information

Item Value
gene id G593334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29169235 ~ 29173452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676360
gttatgaactaacaggtataaatgatggtttatgaattaacaggtataaatggtgggttatgaactaaaaggtataaatgatggcttatgaattaacaggtataaatgatgggttatgaatgaacaggtatacATGATgggatatgaactaacaggtataaatgatgggttatgaattaacatgtataaatgatgggatatgaatgaacaggtataaatgatgggttaagaattaacaggtattaatgatgggttatgaactaacggGTTTAAATGaggggttatgaattaacaggtataaatgatgggttatgaattaaaaggttgaaatgatgggttatgaactaacaggtggaaatgatgggctatgaatgaacaggtataaatgatgggttatgaatgaacaggtataaatgatgggttatgaacgaacaggtataaatgatgggttatgaactaacaggtataaatgacaggtaatgaattaacaggtataaatgatgggttatgaatgaacaggtataaatgatgggttattaaTTAAAAGGTATAAATgacgggttatgaattaacatgtatac
>TU676361
tgggttatgaactaaaaggtataaatgatggcttatgaattaacaggtataaatgatgggttatgaatgaacaggtatacATGATgggatatgaactaacaggtataaatgatgggttatgaattaacatgtataaatgatgggatatgaatgaacaggtataaatgatgggttaagaattaacaggtattaatgatgggttatgaactaacggGTTTAAATGaggggttatgaattaacaggtataaatgatgggttatgaattaaaaggttgaaatgatgggttatgaactaacaggtggaaatgatgggctatgaatgaacaggtataaatgatgggttatgaatgaacaggtataaatgatgggttatgaacgaacaggtataaatgatgggttatgaactaacaggtataaatgacaggtaatgaattaacaggtataaatgatgggttatgaatgaacaggtataaatgatgggttattaaTTAAAAGGTATAAATgacgggttatgaattaacatgtatac

Function

NR:

description
PREDICTED: GATA zinc finger domain-containing protein 14, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676360 False 581 lncRNA 0.31 3 29169235 29173452
TU676361 True 528 lncRNA 0.31 2 29170855 29173452

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 69824 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 134629 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 155984 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 176998 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 191622 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 156132 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 216165 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 240418 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 390357 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 512964 29686416 ~ 29703056 (+)
G593330 NA non-coding upstream 7538 29161195 ~ 29161697 (+)
G593329 NA non-coding upstream 14831 29154086 ~ 29154404 (+)
G593324 NA non-coding upstream 18891 29148572 ~ 29150344 (+)
G593323 NA non-coding upstream 34320 29134363 ~ 29134915 (+)
G593322 NA non-coding upstream 35366 29132997 ~ 29133869 (+)
G593336 NA non-coding downstream 959 29174411 ~ 29181625 (+)
G593337 NA non-coding downstream 3140 29176592 ~ 29182196 (+)
G593340 NA non-coding downstream 18276 29191728 ~ 29192387 (+)
G593341 NA non-coding downstream 19039 29192491 ~ 29193079 (+)
G593342 NA non-coding downstream 19692 29193144 ~ 29193747 (+)
G593283 NA other upstream 104643 29059698 ~ 29064592 (+)
G593171 NA other upstream 276810 28892163 ~ 28892425 (+)
G593144 NA other upstream 328152 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1294814 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1461941 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 354575 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 858507 30031959 ~ 30032621 (+)
G596168 NA other downstream 1729727 30903179 ~ 30903887 (+)
G596297 NA other downstream 1908269 31081721 ~ 31082290 (+)

Expression


Co-expression Network