G593335


Basic Information

Item Value
gene id G593335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29170354 ~ 29171707 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676362
gttatgaattaaaatattttaatgatgggttatgaatgaacaggtataaatgatgggttatgaattaaaaggtttaaatgatgggttatgaattaacaggtataaatgatgggttatgaactaacaggtataaatgatgggttatgaactaacaggtataaatgatggtttatgagttaacaggtataaatggtgggttatgaactaaaaggtataaatgatgggttatgaatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676362 True 235 lncRNA 0.28 2 29170354 29171707

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 70943 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 135748 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 157103 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 178117 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 192741 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 157877 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 217910 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 242163 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 392102 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 514709 29686416 ~ 29703056 (+)
G593330 NA non-coding upstream 8657 29161195 ~ 29161697 (+)
G593329 NA non-coding upstream 15950 29154086 ~ 29154404 (+)
G593324 NA non-coding upstream 20010 29148572 ~ 29150344 (+)
G593323 NA non-coding upstream 35439 29134363 ~ 29134915 (+)
G593322 NA non-coding upstream 36485 29132997 ~ 29133869 (+)
G593336 NA non-coding downstream 2704 29174411 ~ 29181625 (+)
G593337 NA non-coding downstream 4885 29176592 ~ 29182196 (+)
G593340 NA non-coding downstream 20021 29191728 ~ 29192387 (+)
G593341 NA non-coding downstream 20784 29192491 ~ 29193079 (+)
G593342 NA non-coding downstream 21437 29193144 ~ 29193747 (+)
G593283 NA other upstream 105762 29059698 ~ 29064592 (+)
G593171 NA other upstream 277929 28892163 ~ 28892425 (+)
G593144 NA other upstream 329271 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1295933 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1463060 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 356320 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 860252 30031959 ~ 30032621 (+)
G596168 NA other downstream 1731472 30903179 ~ 30903887 (+)
G596297 NA other downstream 1910014 31081721 ~ 31082290 (+)

Expression


Co-expression Network