G593336


Basic Information

Item Value
gene id G593336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29174411 ~ 29181625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676365
gttatgaactaaaaggtataaatggtgggttatgaatgaacaggtataaatgatgggttatgaactaacaggtataaatgatggtttatgaattaacaggtataaatggtgggttatgaactaaaaggtataaatgatggcttatgaattaacaggtataaatgatgggttatgaatgaacaggtatacATGATgggatatgaactaacaggtataaatgatgggttatgaattaacatgtataaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676365 True 249 lncRNA 0.30 2 29174411 29181625

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 75000 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 139805 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 161160 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 182174 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 196798 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 147959 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 207992 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 232245 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 382184 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 504791 29686416 ~ 29703056 (+)
G593334 NA non-coding upstream 959 29169235 ~ 29173452 (+)
G593335 NA non-coding upstream 2704 29170354 ~ 29171707 (+)
G593330 NA non-coding upstream 12714 29161195 ~ 29161697 (+)
G593329 NA non-coding upstream 20007 29154086 ~ 29154404 (+)
G593324 NA non-coding upstream 24067 29148572 ~ 29150344 (+)
G593340 NA non-coding downstream 10103 29191728 ~ 29192387 (+)
G593341 NA non-coding downstream 10866 29192491 ~ 29193079 (+)
G593342 NA non-coding downstream 11519 29193144 ~ 29193747 (+)
G593343 NA non-coding downstream 12287 29193912 ~ 29194307 (+)
G593344 NA non-coding downstream 13988 29195613 ~ 29279455 (+)
G593283 NA other upstream 109819 29059698 ~ 29064592 (+)
G593171 NA other upstream 281986 28892163 ~ 28892425 (+)
G593144 NA other upstream 333328 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1299990 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1467117 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 346402 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 850334 30031959 ~ 30032621 (+)
G596168 NA other downstream 1721554 30903179 ~ 30903887 (+)
G596297 NA other downstream 1900096 31081721 ~ 31082290 (+)

Expression


Co-expression Network