G593354


Basic Information

Item Value
gene id G593354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29237042 ~ 29255486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676385
atgctatggttagcagaaaatgttttcgatccatcgaccactgggtaatggacctagcacgcttctgctgggccacaatgtttccaaccaccccagatgggacttgaacccacaattcctggcttaggaggccagtgccttatccattaggccactggggcaatgtctacctttcacaaccagtacgaactggttatgggcccagcatgcatccgctgcacaactctgctttcagccacttcagcaaagactaaacctcacaatccatggcttaggaggccagtgtctaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676385 True 292 lncRNA 0.51 2 29237042 29255486

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 137631 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 202436 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 223791 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 244805 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 259429 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 74098 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 134131 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 158384 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 308323 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 430930 29686416 ~ 29703056 (+)
G593343 NA non-coding upstream 42735 29193912 ~ 29194307 (+)
G593342 NA non-coding upstream 43295 29193144 ~ 29193747 (+)
G593341 NA non-coding upstream 43963 29192491 ~ 29193079 (+)
G593340 NA non-coding upstream 44655 29191728 ~ 29192387 (+)
G593337 NA non-coding upstream 54846 29176592 ~ 29182196 (+)
G593358 NA non-coding downstream 29951 29285437 ~ 29285642 (+)
G593365 NA non-coding downstream 40631 29296117 ~ 29296354 (+)
G593366 NA non-coding downstream 41642 29297128 ~ 29297427 (+)
G593367 NA non-coding downstream 42490 29297976 ~ 29298672 (+)
G593370 NA non-coding downstream 46309 29301795 ~ 29308953 (+)
G593283 NA other upstream 172450 29059698 ~ 29064592 (+)
G593171 NA other upstream 344617 28892163 ~ 28892425 (+)
G593144 NA other upstream 395959 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1362621 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1529748 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 272541 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 776473 30031959 ~ 30032621 (+)
G596168 NA other downstream 1647693 30903179 ~ 30903887 (+)
G596297 NA other downstream 1826235 31081721 ~ 31082290 (+)

Expression


Co-expression Network