G593358


Basic Information

Item Value
gene id G593358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29285437 ~ 29285642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676390
GTGATACGTGGTATAGAAAAGTCTAATCTTAGGAGAGTACATGAGGCACTATACTGTGTGTCTATCTGGTCAAAACCCCTGATACAGGTGCCCCTCCACCTTCTGGTGGGGTGGATCATGTCTACAGAGAAACCTAGATTCAaatacttagatgtgtgtgtattgggtatatgttgtgaaattgttagatataacttgttagatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676390 True 206 lncRNA 0.40 1 29285437 29285642

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 186026 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 250831 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 272186 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 293200 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 307824 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 43942 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 103975 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 128228 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 278167 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 400774 29686416 ~ 29703056 (+)
G593344 NA non-coding upstream 5982 29195613 ~ 29279455 (+)
G593354 NA non-coding upstream 29951 29237042 ~ 29255486 (+)
G593343 NA non-coding upstream 91130 29193912 ~ 29194307 (+)
G593342 NA non-coding upstream 91690 29193144 ~ 29193747 (+)
G593341 NA non-coding upstream 92358 29192491 ~ 29193079 (+)
G593365 NA non-coding downstream 10475 29296117 ~ 29296354 (+)
G593366 NA non-coding downstream 11486 29297128 ~ 29297427 (+)
G593367 NA non-coding downstream 12334 29297976 ~ 29298672 (+)
G593370 NA non-coding downstream 16153 29301795 ~ 29308953 (+)
G593441 NA non-coding downstream 131215 29416857 ~ 29418493 (+)
G593283 NA other upstream 220845 29059698 ~ 29064592 (+)
G593171 NA other upstream 393012 28892163 ~ 28892425 (+)
G593144 NA other upstream 444354 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1411016 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1578143 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 242385 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 746317 30031959 ~ 30032621 (+)
G596168 NA other downstream 1617537 30903179 ~ 30903887 (+)
G596297 NA other downstream 1796079 31081721 ~ 31082290 (+)

Expression


Co-expression Network