G593366


Basic Information

Item Value
gene id G593366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29297128 ~ 29297427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676402
AAATATAAATTCCCCGCAAATGAAGGATCCAGATTCGTCCACTTGTTCTGTAGACATGCATTCAGCACTCCACGGGTCAGAACCTGGAATCCGCTGGTACCTCGCGATCGATTTCTCCAGAGTCCTGGAAATAAGGCCTCGTACACAGGGAATTAGACAACAGCCCCATAAAACTAAAACAGTCACACAGGTGAATGTAGCCCAtgatcaaaatatttttcaattTTCCAAACATACTATCAAACCAATTAGTCAGAGAAGTATCCACCCCAGAGTTTTCTGCCAAACCGTGAGCCAGGG

Function

NR:

description
PREDICTED: endogenous retrovirus group PABLB member 1 Env polyprotein-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU676402 True 300 lncRNA 0.44 1 29297128 29297427

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 197717 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 262522 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 283877 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 304891 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 319515 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 32157 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 92190 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 116443 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 266382 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 388989 29686416 ~ 29703056 (+)
G593365 NA non-coding upstream 774 29296117 ~ 29296354 (+)
G593358 NA non-coding upstream 11486 29285437 ~ 29285642 (+)
G593344 NA non-coding upstream 17673 29195613 ~ 29279455 (+)
G593354 NA non-coding upstream 41642 29237042 ~ 29255486 (+)
G593343 NA non-coding upstream 102821 29193912 ~ 29194307 (+)
G593367 NA non-coding downstream 549 29297976 ~ 29298672 (+)
G593370 NA non-coding downstream 4368 29301795 ~ 29308953 (+)
G593441 NA non-coding downstream 119430 29416857 ~ 29418493 (+)
G593444 NA non-coding downstream 123478 29420905 ~ 29463664 (+)
G593493 NA non-coding downstream 190368 29487795 ~ 29539669 (+)
G593283 NA other upstream 232536 29059698 ~ 29064592 (+)
G593171 NA other upstream 404703 28892163 ~ 28892425 (+)
G593144 NA other upstream 456045 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1422707 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1589834 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 230600 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 734532 30031959 ~ 30032621 (+)
G596168 NA other downstream 1605752 30903179 ~ 30903887 (+)
G596297 NA other downstream 1784294 31081721 ~ 31082290 (+)

Expression


Co-expression Network