G593493


Basic Information

Item Value
gene id G593493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29487795 ~ 29539669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676542
GGTTCAACGACTGGAGACGGTACATACTACTGGTGTTGAACAGATCTccaacctcctcttcttcctccaatgtgacagtcatctccccctcctctttcactccaaaaactACATCCTccactttctcttcctcctcttcttttactgtaacatcctcctcctgtttcactctgaacgcgtctttctcttcttctttcactgtaacagcctcacccGCTAATTGTTTTCTTAttgtaacatcctcctctttcacaagagcttctttctccgtcaagcagacctcctcttctttatcaagaggagagtagcttagtgaactcatggtcggggatgttagctagctagcattagagACTAGCCTAGTTCTAAACTAACTTATGAAACCAGCTAGCTGACAAACAATGTAAATATATAATTAAATGGGCCAACAAGTACATACGACAGAAGTGTGTTTAATACACAGCGACTAATATACACCAAAACAGTGTAAAGAGCGTGAAAGTTGTAGCTATGTTTGCTAGAAAGCTACCGAGGTGTCTGACTAGCTGTTGAAGGAGCGTCCCGCCCCG

Function

NR:

description
coiled-coil domain-containing glutamate-rich protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676542 True 569 lncRNA 0.44 2 29487795 29539669

Neighbor

gene id symbol gene type direction distance location
LOC118965282 NA coding upstream 45125 29413870 ~ 29442670 (+)
LOC118965283 NA coding upstream 91611 29389617 ~ 29396184 (+)
LOC110527621 NA coding upstream 388384 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 453189 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 474544 29010978 ~ 29013251 (+)
LOC110527623 NA coding downstream 24140 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 146747 29686416 ~ 29703056 (+)
LOC118965277 NA coding downstream 255028 29794697 ~ 29804454 (+)
trnak-uuu-3 NA coding downstream 351210 29890879 ~ 29890951 (+)
LOC110528937 NA coding downstream 392156 29931825 ~ 29944679 (+)
G593444 NA non-coding upstream 24131 29420905 ~ 29463664 (+)
G593441 NA non-coding upstream 69302 29416857 ~ 29418493 (+)
G593370 NA non-coding upstream 178842 29301795 ~ 29308953 (+)
G593367 NA non-coding upstream 189123 29297976 ~ 29298672 (+)
G593366 NA non-coding upstream 190368 29297128 ~ 29297427 (+)
G593597 NA non-coding downstream 175044 29714713 ~ 29715027 (+)
G593628 NA non-coding downstream 241458 29781127 ~ 29822082 (+)
G593662 NA non-coding downstream 298771 29838440 ~ 29839079 (+)
G593695 NA non-coding downstream 369168 29908837 ~ 29909102 (+)
LOC110527619 LOC106578599 other upstream 124444 29329584 ~ 29503787 (+)
G593283 NA other upstream 423203 29059698 ~ 29064592 (+)
G593171 NA other upstream 595370 28892163 ~ 28892425 (+)
G593144 NA other upstream 646712 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1613374 27854006 ~ 27874521 (+)
G593774 LOC106593940 other downstream 492290 30031959 ~ 30032621 (+)
G596168 NA other downstream 1363510 30903179 ~ 30903887 (+)
G596297 NA other downstream 1542052 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2469645 32007023 ~ 32013203 (+)
G599004 NA other downstream 3696144 33235813 ~ 33236636 (+)

Expression


Co-expression Network