G594902


Basic Information

Item Value
gene id G594902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29634812 ~ 29688275 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678072
gttgccatgcacctgcaaataagattgctcagatgtgtgagtgccttttgaatattacattttacattttaaccCACCAATTTTACAATTTCACCCACCATGAGATccactaaatctgcccaagaagaggcaaacaaaagaaaaacccacaacaaacttaaagacaggaagcaaaccaaaacaGTAACGAGTAAACAGTAACAGCTAACAAAATAActggtgtaacacatactgactaacgaggcgACACCAATCAGTGTGCCCTACGTGCTAACGAGCTAGACGTGCTAACGACCTCAAAGTCCAACCttaaaacataaatggaaaaaccaaagccaGTAACACCTTCCCCCTTTAAGACAACaacaaatatatcctatatttttgTTGGAAAAGTTTGCgcaccaccaacagaaaacaacttccatttcacaTTATAATCAACTACAATGCTTCACCTTCTACAATATTAACATGGTATTATTTCTCACCTTTTTCTTTCTATAGAATCCTAAAACAAATTTAGTAAAAAAActccactagcttctagaactctcatcttcctaaaactcactagcttcttgAACTCTCGTCCCCTTCGAACGAGCCCAAACAAAACTCATCTCCAATACGGAAAAACTTGCAGTCAAAATAAATTGTGATGCACTGGCTAAAATCAAAACACAAAACTTTTTGACTGCCCACCCTTGAGACAATCAGCAACCAaatactccttctacaatgtTTGATATAATGAAAAAACTCCTTCAtgcatgtattttctgatgtttaatcagatatcttttatcagagtatctcttgtcacattgatcacagctataaggtttctctcctgtatgtgttctctggtgtgatatcaggtggcttgactgagtaaaacttttcccacattgagtacagctataaggattatttcctgtgtgtgttctctggtgagtagttagctggctagatgtagtaaaattcttcccacattgagcacagctatgaggtttctctccggtgtgtgttctctggtgtgctATCAAGTGGCTTGACTGAGTAAAAtgcttcccacattgatcacagctataaggtttctgtcctgtgtgtgttctctggtgtgatttcAGGGTGTGTGGCCAagaaaaactcttcccacattgactacagctataagatttctctcctgtgtgtgttctctggtgtgatttcAGGTTATGtggctgagtaaaactcttcccacattgaccacagcaataaggtttatctcctgtgtgtgttctctggtgtaccaACAGATTGTTATATGTCGTGTAACTCTTCCCACATTCATCACAGCTAcagggtttctctcctgtgtgtgttttctggtgtGATTTTAATTGTCCTGAGAGAagaaaactctttccacagtcagagcagctaaaaggtttctctcctgtatggATTTTCTGATGCACTTTAACGACTTTTGAGgaggtgaatctcttcccacaaTGAGCACAGCTATAGGGTTtaactcctgtgtgtgttctctggtgtgatatcaggatggttgactgagtaaaactcttcccacattgagtacagctataaggtttctctcgattctctcctgtgtgtgttctatgGTGTACCTTCAGCTGGCTAGATATAATAAAACTCTctccacattgattacagctaaaaggtttctctcctgtgtgtgttctatgGTGTACCTTCAGCTTGCTAGAAcaaacaaaactcttcccacattgagtacagctatatggtttctctcgtttctctcctgtgtgtgttctctgatgtgaTATCAGGCTTCTTGACTGGGTAAAGCTCTttccacattgattacagctaaaaggtttctctcctgtgtgtgttctctggtgtcgcTTCAGACAGCTAGAacgaacaaaactcttcccacatttgGTACAGCCAAAAGGTTTATCTTCAGTGTGAATTCTTTGATGTATTTTAAGTTTTACTGAGGAGTTTAATattttcccacagtcagagcagcaatgagatttcttccctgtgggtctctgcAGGTGTTTCTTGAAGAGTTCTGatgtggagagactcttctctgcctcatcAGCATCAttatgttgttgaggctccccagaggatccacgatagtcccgTATCTG

Function

NR:

description
zinc finger protein 850-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678072 True 2165 lncRNA 0.40 3 29634812 29688275

Neighbor

gene id symbol gene type direction distance location
LOC110527615 LOC106610831 coding downstream 95118 29525727 ~ 29539694 (-)
LOC110527636 LOC106586052 coding downstream 139532 29454045 ~ 29495280 (-)
LOC118965278 NA coding downstream 213158 29416507 ~ 29421654 (-)
LOC118965281 LOC106591606 coding downstream 220987 29402557 ~ 29413825 (-)
LOC110527632 LOC106564416 coding downstream 351951 29278113 ~ 29282861 (-)
LOC118965276 LOC106578600 coding upstream 40501 29728776 ~ 29733555 (-)
LOC110527637 NA coding upstream 145447 29833722 ~ 29838609 (-)
trnaw-cca-2 NA coding upstream 202374 29890649 ~ 29890720 (-)
LOC118965350 LOC106593417 coding upstream 338428 30026703 ~ 30028202 (-)
LOC110527614 NA coding upstream 426359 30114634 ~ 30119849 (-)
G594913 NA non-coding downstream 6738 29624425 ~ 29628074 (-)
G594864 NA non-coding downstream 127725 29506801 ~ 29507087 (-)
G594762 NA non-coding downstream 139682 29416855 ~ 29495130 (-)
G594809 NA non-coding downstream 183413 29375839 ~ 29451399 (-)
G594804 LOC106593411 non-coding downstream 270812 29363090 ~ 29364000 (-)
G594952 NA non-coding upstream 11783 29700058 ~ 29701266 (-)
G594977 NA non-coding upstream 55134 29743409 ~ 29844166 (-)
G595000 NA non-coding upstream 106463 29794738 ~ 29804394 (-)
G595001 NA non-coding upstream 114300 29802575 ~ 29819824 (-)
G595083 NA non-coding upstream 241265 29929540 ~ 29930735 (-)
G594905 NA other downstream 8913 29589993 ~ 29625899 (-)
G594906 NA other downstream 22076 29599631 ~ 29612736 (-)
G594900 NA other downstream 41350 29568201 ~ 29593462 (-)
G594636 LOC106593246 other downstream 608763 29024407 ~ 29026049 (-)
G594968 LOC106591690 other upstream 33401 29721676 ~ 29727490 (-)
G595022 NA other upstream 139678 29827953 ~ 29829565 (-)
G595364 NA other upstream 621896 30310171 ~ 30310934 (-)
LOC110527646 asip other upstream 915900 30604097 ~ 30611268 (-)
G596094 NA other upstream 1155906 30844181 ~ 30844624 (-)

Expression


Co-expression Network