G593597


Basic Information

Item Value
gene id G593597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29714713 ~ 29715027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676656
TCTAACAAGTTCTTTGAATAaccttttggggctgtttttcattgaccAAGAACTCTACGGTTCTTATGGGATCTGAGAACAACTCCAGTTGAACCCTTAATTTTTAGAGTTGTAgtcggctctatttactctcagattcaaaaCATGCTGATTAGCATCAACGATCAATTCAGCTGCTGCTGCttcaatacagtatgaggtgagacggtgaactgatgttgaactgggcagtcagctgctgctgctccaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676656 True 253 lncRNA 0.42 2 29714713 29715027

Neighbor

gene id symbol gene type direction distance location
LOC110527616 NA coding upstream 11657 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 77944 29563350 ~ 29636769 (+)
LOC110527619 LOC106578599 coding upstream 210926 29329584 ~ 29503787 (+)
LOC118965282 NA coding upstream 272043 29413870 ~ 29442670 (+)
LOC118965283 NA coding upstream 318529 29389617 ~ 29396184 (+)
LOC118965277 NA coding downstream 79670 29794697 ~ 29804454 (+)
trnak-uuu-3 NA coding downstream 175852 29890879 ~ 29890951 (+)
LOC110528937 NA coding downstream 216798 29931825 ~ 29944679 (+)
LOC110527618 NA coding downstream 259939 29974966 ~ 29983540 (+)
LOC110527626 NA coding downstream 294641 30009668 ~ 30016052 (+)
G593493 NA non-coding upstream 175044 29487795 ~ 29539669 (+)
G593513 LOC106610831 non-coding upstream 185803 29528027 ~ 29528910 (+)
G593444 NA non-coding upstream 251049 29420905 ~ 29463664 (+)
G593441 NA non-coding upstream 296220 29416857 ~ 29418493 (+)
G593628 NA non-coding downstream 66100 29781127 ~ 29822082 (+)
G593662 NA non-coding downstream 123413 29838440 ~ 29839079 (+)
G593695 NA non-coding downstream 193810 29908837 ~ 29909102 (+)
G593708 NA non-coding downstream 206395 29921422 ~ 29970210 (+)
G593716 NA non-coding downstream 215851 29930878 ~ 29974579 (+)
G593283 NA other upstream 650121 29059698 ~ 29064592 (+)
G593171 NA other upstream 822288 28892163 ~ 28892425 (+)
G593144 NA other upstream 873630 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 316932 30031959 ~ 30032621 (+)
G596168 NA other downstream 1188152 30903179 ~ 30903887 (+)
G596297 NA other downstream 1366694 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2294287 32007023 ~ 32013203 (+)
G599004 NA other downstream 3520786 33235813 ~ 33236636 (+)

Expression


Co-expression Network