G595000


Basic Information

Item Value
gene id G595000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29794738 ~ 29804394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678178
caacacaatggcttcacatgaatttacaaaaataaacagaCATATTTAATACACAACACATATAAGATGATAAAAAACAGAAGATTAACAACTGAAAGACTAAGGAAAATCCTCTGATTAAAATATTAACAACATGAGGCAATATTCAACcataacgagatggacaagccagcacaggtgtaacacagtgactaacgaggtgacaccaatcagtgcgtCCTACATGCTGAACGTAAACGGGAGCTATACGTGCTGACGAGCTATACGTGCTAAAATCCAACCTAAAAACCAAAGTGTGTAAAACCTTCCCCTTTAAGACAACACATATATTCAATATTTTTGATAGACAGGTTTGCTtaccaccaacagaaaacaacttcaatttcacattataatcaactacaatgcttcaccttcaccaatataaacatggtgtctactggctggcaacaattaaaaacaagaaaaaacacGTATCTctaaataataatatacaatCATATTATTTTTCTAAATTTTCTTTCTATAGaatcctaaaactcactagcttctagaactctcgtcttcctaaaactcactaacttctagaactctcgtcttcctaaaactcactagcttctagaactctcgtctttcactctgaacgcctcttcctcttctttcacagtaacagcctcaacctctacttcttgttttactgtgatatcTTCCTCCTCTTTAGAAGGAGGGTAGCTTAGTAACCTCATGGTTGGAGATGTTAGCcagctaggctaatgctaacttaaccagcccgCTAGCTGACTAATAACAACACAGTGCAATTACATCGGATAACTAACTAGACGACAGAAGTGGGTTTAAAACACAGTGGCTAATATACACTAAAGCGTCTAAAGAGCTTCATTGGTTCGTCTAttttgtctagcaagctaccgagcT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678178 True 939 lncRNA 0.37 2 29794738 29804394

Neighbor

gene id symbol gene type direction distance location
LOC118965276 LOC106578600 coding downstream 61183 29728776 ~ 29733555 (-)
LOC110527615 LOC106610831 coding downstream 255044 29525727 ~ 29539694 (-)
LOC110527636 LOC106586052 coding downstream 299458 29454045 ~ 29495280 (-)
LOC118965278 NA coding downstream 373084 29416507 ~ 29421654 (-)
LOC118965281 LOC106591606 coding downstream 380913 29402557 ~ 29413825 (-)
LOC110527637 NA coding upstream 29328 29833722 ~ 29838609 (-)
trnaw-cca-2 NA coding upstream 86255 29890649 ~ 29890720 (-)
LOC118965350 LOC106593417 coding upstream 222309 30026703 ~ 30028202 (-)
LOC110527614 NA coding upstream 310240 30114634 ~ 30119849 (-)
LOC110527624 LOC106595982 coding upstream 317581 30121975 ~ 30126819 (-)
G594952 NA non-coding downstream 93472 29700058 ~ 29701266 (-)
G594934 NA non-coding downstream 120789 29669112 ~ 29673949 (-)
G594921 NA non-coding downstream 144377 29643896 ~ 29650361 (-)
G594922 NA non-coding downstream 144978 29646415 ~ 29649760 (-)
G594920 NA non-coding downstream 151440 29641126 ~ 29643298 (-)
G595083 NA non-coding upstream 125146 29929540 ~ 29930735 (-)
G595045 NA non-coding upstream 127318 29931712 ~ 29932289 (-)
G595033 NA non-coding upstream 137449 29941843 ~ 29944311 (-)
G595119 NA non-coding upstream 176611 29981005 ~ 29981778 (-)
G595216 NA non-coding upstream 353040 30157434 ~ 30165205 (-)
G594968 LOC106591690 other downstream 67248 29721676 ~ 29727490 (-)
G594905 NA other downstream 168839 29589993 ~ 29625899 (-)
G594906 NA other downstream 182002 29599631 ~ 29612736 (-)
G594900 NA other downstream 201276 29568201 ~ 29593462 (-)
G594762 NA other downstream 299608 29416855 ~ 29495130 (-)
G595022 NA other upstream 23559 29827953 ~ 29829565 (-)
G595364 NA other upstream 505777 30310171 ~ 30310934 (-)
LOC110527646 asip other upstream 799781 30604097 ~ 30611268 (-)
G596094 NA other upstream 1039787 30844181 ~ 30844624 (-)
G596039 NA other upstream 1058463 30862857 ~ 30863320 (-)

Expression


Co-expression Network