G593695


Basic Information

Item Value
gene id G593695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29908837 ~ 29909102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676760
AGACATGTCTGATTTCAAGAGGAAACTCCTGCAATGTCTGTAGTAAACCACACGGAATCTGGCaataatgtgtacatcactgGTTATAGGACCTTTTTTAGAAAACAGCTaactacatttacattttgATTCTAGTGGGTCACCAACGTGGTAAGTGTAACATAACTCTTCTTTTTGTTACTCACTTTTTGTTAAATCACAGAAATAGTACTCTTTCAAATCAGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676760 True 228 lncRNA 0.36 2 29908837 29909102

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-3 NA coding upstream 17886 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 104383 29794697 ~ 29804454 (+)
LOC110527616 NA coding upstream 205781 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 272068 29563350 ~ 29636769 (+)
LOC118965282 NA coding upstream 466167 29413870 ~ 29442670 (+)
LOC110528937 NA coding downstream 22723 29931825 ~ 29944679 (+)
LOC110527618 NA coding downstream 65864 29974966 ~ 29983540 (+)
LOC110527626 NA coding downstream 100566 30009668 ~ 30016052 (+)
LOC110527639 NA coding downstream 269295 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 552257 30461359 ~ 30499559 (+)
G593662 NA non-coding upstream 69758 29838440 ~ 29839079 (+)
G593628 NA non-coding upstream 86755 29781127 ~ 29822082 (+)
G593597 NA non-coding upstream 193810 29714713 ~ 29715027 (+)
G593493 NA non-coding upstream 369168 29487795 ~ 29539669 (+)
G593708 NA non-coding downstream 12320 29921422 ~ 29970210 (+)
G593716 NA non-coding downstream 21776 29930878 ~ 29974579 (+)
G593747 NA non-coding downstream 64525 29973627 ~ 30124102 (+)
G593760 NA non-coding downstream 89264 29998366 ~ 30000339 (+)
G593832 NA non-coding downstream 210103 30119205 ~ 30126801 (+)
G593513 LOC106610831 other upstream 379927 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 545486 29329584 ~ 29503787 (+)
G593283 NA other upstream 844245 29059698 ~ 29064592 (+)
G593171 NA other upstream 1016412 28892163 ~ 28892425 (+)
G593144 NA other upstream 1067754 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 122857 30031959 ~ 30032621 (+)
G596168 NA other downstream 994077 30903179 ~ 30903887 (+)
G596297 NA other downstream 1172619 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2100212 32007023 ~ 32013203 (+)
G599004 NA other downstream 3326711 33235813 ~ 33236636 (+)

Expression


Co-expression Network