G595083



Basic Information


Item Value
gene id G595083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29929540 ~ 29930735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU678269
AAGGTCAGGgagcgtgcctgcctgcctgaacCGGCCCTTTCGAGCaaaaggtataaatgatgggttatgaattaacaggtataaatgatgggttatgaatgaacaggtataaatgatgggttatgaactaacaggtataaatgatgggttatgaattaacaggtataaatgatgggttatgaactaacaggtataaatgatgggttatgaactaacaggtataaatgatgggttatgaactaacaggtataa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU678269 True 252 lncRNA 0.37 2 29929540 29930735

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-2 NA coding downstream 38820 29890649 ~ 29890720 (-)
LOC110527637 NA coding downstream 90931 29833722 ~ 29838609 (-)
LOC118965276 LOC106578600 coding downstream 195985 29728776 ~ 29733555 (-)
LOC110527615 LOC106610831 coding downstream 389846 29525727 ~ 29539694 (-)
LOC110527636 LOC106586052 coding downstream 434260 29454045 ~ 29495280 (-)
LOC118965350 LOC106593417 coding upstream 95968 30026703 ~ 30028202 (-)
LOC110527614 NA coding upstream 183899 30114634 ~ 30119849 (-)
LOC110527624 LOC106595982 coding upstream 191240 30121975 ~ 30126819 (-)
LOC110527641 LOC106582623 coding upstream 382644 30311282 ~ 30394791 (-)
LOC110527645 NA coding upstream 654768 30585503 ~ 30593851 (-)
G594977 NA non-coding downstream 85374 29743409 ~ 29844166 (-)
G595001 NA non-coding downstream 109716 29802575 ~ 29819824 (-)
G595000 NA non-coding downstream 125146 29794738 ~ 29804394 (-)
G594952 NA non-coding downstream 228274 29700058 ~ 29701266 (-)
G594934 NA non-coding downstream 255591 29669112 ~ 29673949 (-)
G595045 NA non-coding upstream 977 29931712 ~ 29932289 (-)
G595033 NA non-coding upstream 11108 29941843 ~ 29944311 (-)
G595119 NA non-coding upstream 50270 29981005 ~ 29981778 (-)
G595216 NA non-coding upstream 226699 30157434 ~ 30165205 (-)
G595244 NA non-coding upstream 236205 30166940 ~ 30167233 (-)
G595022 NA other downstream 99975 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 202050 29721676 ~ 29727490 (-)
G594905 NA other downstream 303641 29589993 ~ 29625899 (-)
G594906 NA other downstream 316804 29599631 ~ 29612736 (-)
G594900 NA other downstream 336078 29568201 ~ 29593462 (-)
G595364 NA other upstream 379436 30310171 ~ 30310934 (-)
LOC110527646 asip other upstream 673440 30604097 ~ 30611268 (-)
G596094 NA other upstream 913446 30844181 ~ 30844624 (-)
G596039 NA other upstream 932122 30862857 ~ 30863320 (-)
G596352 NA other upstream 1005430 30936165 ~ 30936614 (-)

Expression



Co-expression Network