G593716


Basic Information

Item Value
gene id G593716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29930878 ~ 29974579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676782
TATCTGCAGGTGTCTATCTGGTCAAAACCACTGATACAGGTgcccctccaccctctggtggGATGGATCATGTCTACAGAGAAACCTAGATTAaaatacttagatttgtgtgtattgggtatatgttgtgaaattgtcctgtcctgccctgtcggAGGGAGAAACACAGGCATCTTGCTACACCCGCAATTATATCTTCTAagcacgtgtatgtgaccaataaaatgtcatttgattttgatttgaaataaaattCCTCCCAAAGGTGCTTTTAGCTGGGGTCAAAATGACTCCAAAGGATTTGaatttgttaaaagttcatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676782 True 325 lncRNA 0.40 2 29930878 29974579

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-3 NA coding upstream 39927 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 126424 29794697 ~ 29804454 (+)
LOC110527616 NA coding upstream 227822 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 294109 29563350 ~ 29636769 (+)
LOC118965282 NA coding upstream 488208 29413870 ~ 29442670 (+)
LOC110527618 NA coding downstream 387 29974966 ~ 29983540 (+)
LOC110527626 NA coding downstream 35089 30009668 ~ 30016052 (+)
LOC110527639 NA coding downstream 203818 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 486780 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 534682 30509261 ~ 30536127 (+)
G593695 NA non-coding upstream 21776 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 91799 29838440 ~ 29839079 (+)
G593628 NA non-coding upstream 108796 29781127 ~ 29822082 (+)
G593597 NA non-coding upstream 215851 29714713 ~ 29715027 (+)
G593760 NA non-coding downstream 23787 29998366 ~ 30000339 (+)
G593832 NA non-coding downstream 144626 30119205 ~ 30126801 (+)
G593835 NA non-coding downstream 147548 30122127 ~ 30123286 (+)
G593836 NA non-coding downstream 150225 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 232012 30206591 ~ 30206882 (+)
G593513 LOC106610831 other upstream 401968 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 567527 29329584 ~ 29503787 (+)
G593283 NA other upstream 866286 29059698 ~ 29064592 (+)
G593171 NA other upstream 1038453 28892163 ~ 28892425 (+)
G593144 NA other upstream 1089795 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 57380 30031959 ~ 30032621 (+)
G596168 NA other downstream 928600 30903179 ~ 30903887 (+)
G596297 NA other downstream 1107142 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2034735 32007023 ~ 32013203 (+)
G599004 NA other downstream 3261234 33235813 ~ 33236636 (+)

Expression


Co-expression Network