G595033


Basic Information

Item Value
gene id G595033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29941843 ~ 29944311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678214
tgaaagttgactagtgacaaaaactgggacctaaaagacacccaccatgagagccactaaatctgcccaagaagaggcaaacaaaagtaCATTtggcttctctctcttttcagggttcactcGACAGGCATGTTGTTGGATCTCGGCCCAGTCCCCAATGTCACCCCTTTGTTAATATGTATTGGCAATAATTAACTTAATGGTGAGGCatggaataataaaacatgtatattttgtCAGGCTGGATGTTTGAAATGTGAGTAGGTGATTTGAGTCAtgcttcttcagtagtggaataaaGACAATTAGCACTTGAATGTTGTAAagaaatactgtagtgatgtaaGATTGTTAATACAATTGATTATATACAAATTGATTATACTGCgtccatgtgtatatatatataatttgtttacctatgcatggccagaacgacatatttgtaccttgtcagctcagctttcggttactggcccaacgctctaaccaccaggctacctgaaAGTACGTTGAAATTAAGTCGTTTTCAAGTCATTTAAAAAACGACCCGAAAAATACAGATTTTAAACTTTCACTTTCAACTACAACCAAACTAATATTGGACGCTGGACATAGTCTTCTTTTCAATTGCCAGGTGtcccaatgtcaaaacacagtctaacgtgtccaaatcaataaccaacatgcagaaacagtttgtaataaattgaaaacctaaacataaaatgtactatatacacaaacatctgccacaataatcatattccttgtattatttttttaaacaagcaccttataaactgcacaagcaccaaaaacgctgttgttttgacaagtagcaataaatcactgatatcgaTTGGGGGGTAAATCAGGTTGTACGTGCTGTTGAAAGTAACACAactaaaaaaacacatggaaatgggagatatcttttacctcactggttagaggacaacctgcagaagacagtcagctacattttggagtGATGCATTTAAATGTAGGGGTCGCTAAACAAAGGAACGCAACACTTATTTGTCATAACTCATCAATATCATGTAGAAATCAAttgtgctgagaggagagagaggaggttgcatgtcctgttaaaactaacagctcaaaaaccacacggaatctcgaaataatgtgtacatcactggttagaggatcatttgtagaaaacagctagacattttgaagtgttggatttctaattccagtgggtcaccaACGTGGTAAGTGTAACACAACTCTTTTTTTTTGTTAGTCACTTTTTGTTAAAGATTTTCCCCCTGgggctaatatccatatcatgctgAAATCAATTGATAAGGGGGCAAACGCTTAggcttctacattgtgacattattaaAATACtcatactacaatgttaaaacattctacattgagACATTAATtaattgatatcatgaaacaactccttcatgtattttctgatatttgatcagagatcttttatcagaTTATCTCTGGTCACAGCTATGaagtttctctcctgtgtgtgttctctggtgccgAGTCAGAATGTTAGATGtaataaaactcttcccacattgatcacagctatagggtttctctcctgtgtgtattctctggtgcactgtcagATCACTAGATTGAACAAAAcgcttcccacattgatcacagatgtaaggtttttctcctgtgtgtgttctctggtgtacaatAAGATggctagatgtagtaaaactcatcccacattgagtacagctaaaATATTTCTCTCCCGTGTGGATTCTCTGACGAATGCCTGATGAGGAGGTGAATCTCTTCCCATGGTCGGAGCAGCAGTGAGTTCTCTTTCCTGTGGATCCCTGCAggtgtttcttgaggtgttctgatctggagagactcttctctgcctcgtcagcatcatgaggttgttgaggctccgcagaggatccacaatagtcacctctctctcctgtgtgaatgacaAAGTCAGACCGATGGTTCAAGGCCTACAACAGCAGAAATTCACTGTAAAAGGTGATGCCAACAGAGtagccatgatgttg

Function

NR:

description
zinc finger protein 239-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678214 True 2069 lncRNA 0.39 3 29941843 29944311

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-2 NA coding downstream 51123 29890649 ~ 29890720 (-)
LOC110527637 NA coding downstream 103234 29833722 ~ 29838609 (-)
LOC118965276 LOC106578600 coding downstream 208288 29728776 ~ 29733555 (-)
LOC110527615 LOC106610831 coding downstream 402149 29525727 ~ 29539694 (-)
LOC110527636 LOC106586052 coding downstream 446563 29454045 ~ 29495280 (-)
LOC118965350 LOC106593417 coding upstream 82392 30026703 ~ 30028202 (-)
LOC110527614 NA coding upstream 170323 30114634 ~ 30119849 (-)
LOC110527624 LOC106595982 coding upstream 177664 30121975 ~ 30126819 (-)
LOC110527641 LOC106582623 coding upstream 369068 30311282 ~ 30394791 (-)
LOC110527645 NA coding upstream 641192 30585503 ~ 30593851 (-)
G595045 NA non-coding downstream 9554 29931712 ~ 29932289 (-)
G595083 NA non-coding downstream 11108 29929540 ~ 29930735 (-)
G594977 NA non-coding downstream 97677 29743409 ~ 29844166 (-)
G595001 NA non-coding downstream 122019 29802575 ~ 29819824 (-)
G595000 NA non-coding downstream 137449 29794738 ~ 29804394 (-)
G595119 NA non-coding upstream 36694 29981005 ~ 29981778 (-)
G595216 NA non-coding upstream 213123 30157434 ~ 30165205 (-)
G595244 NA non-coding upstream 222629 30166940 ~ 30167233 (-)
G595282 NA non-coding upstream 273251 30217562 ~ 30217834 (-)
G595298 NA non-coding upstream 283312 30227623 ~ 30227862 (-)
G595022 NA other downstream 112278 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 214353 29721676 ~ 29727490 (-)
G594905 NA other downstream 315944 29589993 ~ 29625899 (-)
G594906 NA other downstream 329107 29599631 ~ 29612736 (-)
G594900 NA other downstream 348381 29568201 ~ 29593462 (-)
G595364 NA other upstream 365860 30310171 ~ 30310934 (-)
LOC110527646 asip other upstream 659864 30604097 ~ 30611268 (-)
G596094 NA other upstream 899870 30844181 ~ 30844624 (-)
G596039 NA other upstream 918546 30862857 ~ 30863320 (-)
G596352 NA other upstream 991854 30936165 ~ 30936614 (-)

Expression


Co-expression Network