G593747


Basic Information

Item Value
gene id G593747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29973627 ~ 30124102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676817
tccatttaagaatgatggaggccactgtgttcttggggaccttcaatgctgcagagaatgttttggtacccttccccagatttgtgcctcgacgcaatcctgtctcagagctcaaaGGATAATTtctttgacctcgtggcttggtttttgctctgacatccactgttacctgtgggaccttatatagaaaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtgcactccaatcaagttgtagaaacatctcaacaatgaccaatggaaacagtatgcacctgaggtcaatttcaagtctcatagcaaagggtctgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676817 True 335 lncRNA 0.44 2 29973627 30124102

Neighbor

gene id symbol gene type direction distance location
LOC110528937 NA coding upstream 28948 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 82676 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 169173 29794697 ~ 29804454 (+)
LOC110527616 NA coding upstream 270571 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 336858 29563350 ~ 29636769 (+)
LOC110527639 NA coding downstream 54295 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 337257 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 385159 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 437484 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 499382 30623484 ~ 30636008 (+)
G593708 NA non-coding upstream 3417 29921422 ~ 29970210 (+)
G593695 NA non-coding upstream 64525 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 134548 29838440 ~ 29839079 (+)
G593628 NA non-coding upstream 151545 29781127 ~ 29822082 (+)
G593597 NA non-coding upstream 258600 29714713 ~ 29715027 (+)
G593836 NA non-coding downstream 702 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 82489 30206591 ~ 30206882 (+)
G595304 NA non-coding downstream 108403 30232505 ~ 30232724 (+)
G595305 NA non-coding downstream 113172 30237274 ~ 30237492 (+)
G595309 NA non-coding downstream 117421 30241523 ~ 30241761 (+)
G593513 LOC106610831 other upstream 444717 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 610276 29329584 ~ 29503787 (+)
G593283 NA other upstream 909035 29059698 ~ 29064592 (+)
G593171 NA other upstream 1081202 28892163 ~ 28892425 (+)
G593144 NA other upstream 1132544 28835209 ~ 28841083 (+)
G596168 NA other downstream 779077 30903179 ~ 30903887 (+)
G596297 NA other downstream 957619 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1885212 32007023 ~ 32013203 (+)
G599004 NA other downstream 3111711 33235813 ~ 33236636 (+)
G599123 NA other downstream 3166424 33290526 ~ 33295528 (+)

Expression


Co-expression Network