G593760


Basic Information

Item Value
gene id G593760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29998366 ~ 30000339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676831
aggacaacctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagaggagagaattagagaacgcacacttagattcacacaggacaccaaataggacaggagaagtactccagatataacaaactgaccctagccccccga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676831 True 348 lncRNA 0.50 2 29998366 30000339

Neighbor

gene id symbol gene type direction distance location
LOC110527618 NA coding upstream 14826 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 53687 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 107415 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 193912 29794697 ~ 29804454 (+)
LOC110527616 NA coding upstream 295310 29686416 ~ 29703056 (+)
LOC110527626 NA coding downstream 9329 30009668 ~ 30016052 (+)
LOC110527639 NA coding downstream 178058 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 461020 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 508922 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 561247 30561586 ~ 30578870 (+)
G593716 NA non-coding upstream 23787 29930878 ~ 29974579 (+)
G593708 NA non-coding upstream 28156 29921422 ~ 29970210 (+)
G593695 NA non-coding upstream 89264 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 159287 29838440 ~ 29839079 (+)
G593628 NA non-coding upstream 176284 29781127 ~ 29822082 (+)
G593832 NA non-coding downstream 118866 30119205 ~ 30126801 (+)
G593835 NA non-coding downstream 121788 30122127 ~ 30123286 (+)
G593836 NA non-coding downstream 124465 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 206252 30206591 ~ 30206882 (+)
G595304 NA non-coding downstream 232166 30232505 ~ 30232724 (+)
G593513 LOC106610831 other upstream 469456 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 635015 29329584 ~ 29503787 (+)
G593283 NA other upstream 933774 29059698 ~ 29064592 (+)
G593171 NA other upstream 1105941 28892163 ~ 28892425 (+)
G593144 NA other upstream 1157283 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 31620 30031959 ~ 30032621 (+)
G596168 NA other downstream 902840 30903179 ~ 30903887 (+)
G596297 NA other downstream 1081382 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2008975 32007023 ~ 32013203 (+)
G599004 NA other downstream 3235474 33235813 ~ 33236636 (+)

Expression


Co-expression Network