G593774 (LOC106593940)


Basic Information

Item Value
gene id G593774
gene name LOC106593940
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30031959 ~ 30032621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676845
TGCTCAATCTGATGTCGATGCTCGTCTCTATGGGTTACTTTACCCAAGTTGAGCAGAAGTTCATGGTCTCTGGTCATTCTTTTCTTCCTTGTGATCGATCTTTTGCCACCATCGAGAAGAGGCGCAAGGTGTCAGTCCTTCATACACCTGATGATGTTTCAAAGATGATACTTGAAGCACAACCAGCAAAACCATTCAAGGTGATGAGGATGCAATGTGAAGACTTCAGGCACCTCCCAGATTCTGTCCTCAAGCGACCAGCTGGACTACAGATCACCTCAGTGAGGTGGTTAAAAGTCACAGTTGAGGATCCTTGGAATCTGTACGCCAAACAGAGCCACAGTCTATTTGAGGGATGGAAGTCGTGGCTGATCTCCAAACCAAAACAAGGAGCTACACCTCAGCCTCCCTATTTTGCAAGCCACTACCCTAGAGCATATGAGAGTCCTCTGCCCATCAAAAAAAACAAGTACCAAGATCTGATGACCATGCTCAACTACTTGCCAGCTGCTGCACACTCTTTTTATG

Function

NR:

description
uncharacterized protein LOC110524522

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676845 True 528 TUCP 0.46 2 30031959 30032621

Neighbor

gene id symbol gene type direction distance location
LOC110527626 NA coding upstream 15907 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 48419 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 87280 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 141008 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 227505 29794697 ~ 29804454 (+)
LOC110527639 NA coding downstream 145776 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 428738 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 476640 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 528965 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 590863 30623484 ~ 30636008 (+)
G593760 NA non-coding upstream 31620 29998366 ~ 30000339 (+)
G593716 NA non-coding upstream 57380 29930878 ~ 29974579 (+)
G593708 NA non-coding upstream 61749 29921422 ~ 29970210 (+)
G593695 NA non-coding upstream 122857 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 192880 29838440 ~ 29839079 (+)
G593832 NA non-coding downstream 86584 30119205 ~ 30126801 (+)
G593835 NA non-coding downstream 89506 30122127 ~ 30123286 (+)
G593836 NA non-coding downstream 92183 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 173970 30206591 ~ 30206882 (+)
G595304 NA non-coding downstream 199884 30232505 ~ 30232724 (+)
G593513 LOC106610831 other upstream 503049 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 668608 29329584 ~ 29503787 (+)
G593283 NA other upstream 967367 29059698 ~ 29064592 (+)
G593171 NA other upstream 1139534 28892163 ~ 28892425 (+)
G593144 NA other upstream 1190876 28835209 ~ 28841083 (+)
G596168 NA other downstream 870558 30903179 ~ 30903887 (+)
G596297 NA other downstream 1049100 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1976693 32007023 ~ 32013203 (+)
G599004 NA other downstream 3203192 33235813 ~ 33236636 (+)
G599123 NA other downstream 3257905 33290526 ~ 33295528 (+)

Expression


Co-expression Network