G593835


Basic Information

Item Value
gene id G593835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30122127 ~ 30123286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676917
CAGCACCTTTATTGtctcatgtgatttcaggttCTGTGACTGGGAAAATGTCcttccacacagagagagagcagtggtaGGGCTTTTTTGGTGTGTGTCTTCTTATGCTCCTTCCGGCTCCTTAACCAGggaaaactctttccacactgggggCATTGGAAAGGCTATTCTCCtttgtgtattctctcgtgctcTTTTAACAGCCCTTTCTTAGTAAAACTCTTTCTACACTGGGAACAATGGaatggcttttctcctgtgtgtatcctctcATGAGCTTTTAGGTGCCCTGTCTGAGTAAAACTCATTCCACAGTGGGAACAGtgataaggcttttctcctgtgtgtattctctcatgcctttTCAGGTTAGCTAACATGGTAAAActttttccacactgggaacattggaaaggcttttctcctgtgtgtgttctttcgTGCAGTTTTAGGTTCCCTGACCAGCAAAAACTCTTAacacagtgggagcagtggtgttGTCTCGCTGGTTTGGGCGTCTCTGGGTCTGGTTCCCCTGAAGGACTCTCCCCGCTGTCAGAGTCTGGTttctc

Function

NR:

description
zinc finger protein 501-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676917 True 572 lncRNA 0.47 2 30122127 30123286

Neighbor

gene id symbol gene type direction distance location
LOC110527626 NA coding upstream 106075 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 138587 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 177448 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 231176 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 317673 29794697 ~ 29804454 (+)
LOC110527639 NA coding downstream 55111 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 338073 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 385975 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 438300 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 500198 30623484 ~ 30636008 (+)
G593760 NA non-coding upstream 121788 29998366 ~ 30000339 (+)
G593716 NA non-coding upstream 147548 29930878 ~ 29974579 (+)
G593708 NA non-coding upstream 151917 29921422 ~ 29970210 (+)
G593695 NA non-coding upstream 213025 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 283048 29838440 ~ 29839079 (+)
G593836 NA non-coding downstream 1518 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 83305 30206591 ~ 30206882 (+)
G595304 NA non-coding downstream 109219 30232505 ~ 30232724 (+)
G595305 NA non-coding downstream 113988 30237274 ~ 30237492 (+)
G595309 NA non-coding downstream 118237 30241523 ~ 30241761 (+)
G593774 LOC106593940 other upstream 89506 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 593217 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 758776 29329584 ~ 29503787 (+)
G593283 NA other upstream 1057535 29059698 ~ 29064592 (+)
G593171 NA other upstream 1229702 28892163 ~ 28892425 (+)
G596168 NA other downstream 779893 30903179 ~ 30903887 (+)
G596297 NA other downstream 958435 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1886028 32007023 ~ 32013203 (+)
G599004 NA other downstream 3112527 33235813 ~ 33236636 (+)
G599123 NA other downstream 3167240 33290526 ~ 33295528 (+)

Expression


Co-expression Network