G595268


Basic Information

Item Value
gene id G595268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30206591 ~ 30206882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678475
gtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgtttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcaacttcaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678475 True 292 lncRNA 0.50 1 30206591 30206882

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 3265 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 190539 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 223051 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 261912 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 315640 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 254477 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 302379 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 354704 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 416602 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 526701 30733583 ~ 30854816 (+)
G593832 NA non-coding upstream 79790 30119205 ~ 30126801 (+)
G593836 NA non-coding upstream 80651 30124804 ~ 30125940 (+)
G593747 NA non-coding upstream 82489 29973627 ~ 30124102 (+)
G593835 NA non-coding upstream 83305 30122127 ~ 30123286 (+)
G593760 NA non-coding upstream 206252 29998366 ~ 30000339 (+)
G595304 NA non-coding downstream 25623 30232505 ~ 30232724 (+)
G595305 NA non-coding downstream 30392 30237274 ~ 30237492 (+)
G595309 NA non-coding downstream 34641 30241523 ~ 30241761 (+)
G595330 NA non-coding downstream 48085 30254967 ~ 30255230 (+)
G595336 LOC107579696 non-coding downstream 55296 30262178 ~ 30262535 (+)
G593774 LOC106593940 other upstream 173970 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 677681 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 843240 29329584 ~ 29503787 (+)
G593283 NA other upstream 1141999 29059698 ~ 29064592 (+)
G593171 NA other upstream 1314166 28892163 ~ 28892425 (+)
G596168 NA other downstream 696297 30903179 ~ 30903887 (+)
G596297 NA other downstream 874839 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1802432 32007023 ~ 32013203 (+)
G599004 NA other downstream 3028931 33235813 ~ 33236636 (+)
G599123 NA other downstream 3083644 33290526 ~ 33295528 (+)

Expression


Co-expression Network