G595304


Basic Information

Item Value
gene id G595304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30232505 ~ 30232724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678511
AACataacctgaccagagggagcctGTCATCACTATAACCTGACCAGAGGGCACCAGTCATCACAATAAACTGACTAGATGGAGCATCAATAATAACCTGATCAGAGGGAGACGGTCGTCACTataacctgaccagagggagccaaTTGTCAATATAACCTGACTAGGAGGGAGCATCAACATAACCTCACTATTGGGTGCTTCAATATAACCTGACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678511 True 220 lncRNA 0.46 1 30232505 30232724

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 29179 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 216453 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 248965 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 287826 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 341554 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 228635 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 276537 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 328862 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 390760 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 500859 30733583 ~ 30854816 (+)
G595268 NA non-coding upstream 25623 30206591 ~ 30206882 (+)
G593832 NA non-coding upstream 105704 30119205 ~ 30126801 (+)
G593836 NA non-coding upstream 106565 30124804 ~ 30125940 (+)
G593747 NA non-coding upstream 108403 29973627 ~ 30124102 (+)
G593835 NA non-coding upstream 109219 30122127 ~ 30123286 (+)
G595305 NA non-coding downstream 4550 30237274 ~ 30237492 (+)
G595309 NA non-coding downstream 8799 30241523 ~ 30241761 (+)
G595330 NA non-coding downstream 22243 30254967 ~ 30255230 (+)
G595336 LOC107579696 non-coding downstream 29454 30262178 ~ 30262535 (+)
G595342 NA non-coding downstream 41865 30274589 ~ 30278354 (+)
G593774 LOC106593940 other upstream 199884 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 703595 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 869154 29329584 ~ 29503787 (+)
G593283 NA other upstream 1167913 29059698 ~ 29064592 (+)
G593171 NA other upstream 1340080 28892163 ~ 28892425 (+)
G596168 NA other downstream 670455 30903179 ~ 30903887 (+)
G596297 NA other downstream 848997 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1776590 32007023 ~ 32013203 (+)
G599004 NA other downstream 3003089 33235813 ~ 33236636 (+)
G599123 NA other downstream 3057802 33290526 ~ 33295528 (+)

Expression


Co-expression Network