G595305


Basic Information

Item Value
gene id G595305
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30237274 ~ 30237492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678512
ggagccggtcgtcaacatAACCTGACCAGATGGAGCCAGTCATGACTATAACCTGACCTGAGGGAGCCGGTCTTCAACataacctgaccagagggagcctGTCGTCACTATAACCTGACCAGAGGTTACCAGTCATCACAATAAACTGACTAGATGGAGCATCAATAATAACCTGATCAGAGGGAGACGGTCGTCACTataacctgaccagagggagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678512 True 219 lncRNA 0.51 1 30237274 30237492

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 33948 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 221222 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 253734 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 292595 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 346323 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 223867 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 271769 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 324094 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 385992 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 496091 30733583 ~ 30854816 (+)
G595304 NA non-coding upstream 4550 30232505 ~ 30232724 (+)
G595268 NA non-coding upstream 30392 30206591 ~ 30206882 (+)
G593832 NA non-coding upstream 110473 30119205 ~ 30126801 (+)
G593836 NA non-coding upstream 111334 30124804 ~ 30125940 (+)
G593835 NA non-coding upstream 113988 30122127 ~ 30123286 (+)
G595309 NA non-coding downstream 4031 30241523 ~ 30241761 (+)
G595330 NA non-coding downstream 17475 30254967 ~ 30255230 (+)
G595336 LOC107579696 non-coding downstream 24686 30262178 ~ 30262535 (+)
G595342 NA non-coding downstream 37097 30274589 ~ 30278354 (+)
G595358 NA non-coding downstream 63101 30300593 ~ 30300873 (+)
G593774 LOC106593940 other upstream 204653 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 708364 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 873923 29329584 ~ 29503787 (+)
G593283 NA other upstream 1172682 29059698 ~ 29064592 (+)
G593171 NA other upstream 1344849 28892163 ~ 28892425 (+)
G596168 NA other downstream 665687 30903179 ~ 30903887 (+)
G596297 NA other downstream 844229 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1771822 32007023 ~ 32013203 (+)
G599004 NA other downstream 2998321 33235813 ~ 33236636 (+)
G599123 NA other downstream 3053034 33290526 ~ 33295528 (+)

Expression


Co-expression Network