Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_025292 |
| gene name | gngt2a |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 23092762 ~ 23096141 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| gngt2a | Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Is expressed in myotome; pineal complex; visual system; and yolk syncytial layer. Orthologous to human GNGT2 (G protein subunit gamma transducin 2). |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0031680 | G-protein beta/gamma-subunit complex | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0031681 | G-protein beta-subunit binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-7595 | Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Is expressed in myotome; pineal complex; visual system; and yolk syncytial layer. Orthologous to human GNGT2 (G protein subunit gamma transducin 2). |
| ensembl_id | ENSDARG00000010680 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00049933 | False | 644 | mRNA | 0.42 | 3 | 23092762 | 23096141 |
| TCONS_00049934 | True | 597 | mRNA | 0.42 | 3 | 23092813 | 23096131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_025291 | b4galnt2.1 | coding | upstream | 7483 | 23063718 ~ 23085279 (+) |
| XLOC_025290 | nags | coding | upstream | 32641 | 23029484 ~ 23060121 (+) |
| XLOC_025289 | si:ch211-237i5.4 | coding | upstream | 72211 | 22999849 ~ 23020551 (+) |
| XLOC_025288 | lsm12a | coding | upstream | 98329 | 22984098 ~ 22994433 (+) |
| XLOC_025287 | hdac5 | coding | upstream | 116306 | 22905341 ~ 22976456 (+) |
| XLOC_025293 | NA | coding | downstream | 301 | 23096442 ~ 23213329 (+) |
| XLOC_025294 | col1a1a | coding | downstream | 124906 | 23221047 ~ 23239458 (+) |
| XLOC_025295 | ppp1r9ba | coding | downstream | 151184 | 23247325 ~ 23348084 (+) |
| XLOC_025296 | NA | coding | downstream | 310330 | 23406471 ~ 23411521 (+) |
| XLOC_025297 | nr1d1 | coding | downstream | 392511 | 23488652 ~ 23496223 (+) |
| XLOC_025429 | BX649540.1 | misc | downstream | 7152598 | 30248739 ~ 30249036 (+) |
| XLOC_025286 | BX322574.1 | non-coding | upstream | 212315 | 22854673 ~ 22880447 (+) |
| XLOC_025285 | NA | non-coding | upstream | 244566 | 22846336 ~ 22848196 (+) |
| XLOC_025283 | BX649557.1 | non-coding | upstream | 523656 | 22568987 ~ 22569106 (+) |
| XLOC_025276 | NA | non-coding | upstream | 930280 | 22157933 ~ 22162482 (+) |
| XLOC_025274 | NA | non-coding | upstream | 1095204 | 21929928 ~ 21997558 (+) |
| XLOC_025298 | NA | non-coding | downstream | 421818 | 23517959 ~ 23524650 (+) |
| XLOC_025299 | NA | non-coding | downstream | 508337 | 23604478 ~ 23616801 (+) |
| XLOC_025301 | NA | non-coding | downstream | 569020 | 23665161 ~ 23668197 (+) |
