G595391


Basic Information

Item Value
gene id G595391
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30311690 ~ 30311987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678604
gctgagcggcctttcaggttatgtcgatatagtgctcgttttactgtggatatagatacttttgtacctgtttcctccagcatcttcacaaggtcctttgatgttgttctgggattgatttgcatttttcacaccaaagtacgttcatctctaggagacagaacacgtctccttcctggctgcgtgttcccatggtgtttatacttgcgtactattgtttgtacagatgaacgtggtatcttcaggcatttataaattgctcccaaggaggaaCCAGACTTGAATAACGGtcaaatta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678604 True 298 lncRNA 0.42 1 30311690 30311987

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 108364 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 295638 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 328150 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 367011 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 420739 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 149372 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 197274 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 249599 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 311497 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 421596 30733583 ~ 30854816 (+)
G595362 NA non-coding upstream 1033 30310003 ~ 30310657 (+)
G595361 NA non-coding upstream 5424 30305106 ~ 30306266 (+)
G595360 NA non-coding upstream 7421 30303638 ~ 30304269 (+)
G595358 NA non-coding upstream 10817 30300593 ~ 30300873 (+)
G595342 NA non-coding upstream 33336 30274589 ~ 30278354 (+)
G595392 NA non-coding downstream 945 30312932 ~ 30313356 (+)
G595418 NA non-coding downstream 40746 30352733 ~ 30353084 (+)
G595425 NA non-coding downstream 47922 30359909 ~ 30360300 (+)
G595436 NA non-coding downstream 64313 30376300 ~ 30376502 (+)
G595439 NA non-coding downstream 68395 30380382 ~ 30380588 (+)
G593774 LOC106593940 other upstream 279069 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 782780 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 948339 29329584 ~ 29503787 (+)
G593283 NA other upstream 1247098 29059698 ~ 29064592 (+)
G593171 NA other upstream 1419265 28892163 ~ 28892425 (+)
G596168 NA other downstream 591192 30903179 ~ 30903887 (+)
G596297 NA other downstream 769734 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1697327 32007023 ~ 32013203 (+)
G599004 NA other downstream 2923826 33235813 ~ 33236636 (+)
G599123 NA other downstream 2978539 33290526 ~ 33295528 (+)

Expression


Co-expression Network