G595392


Basic Information

Item Value
gene id G595392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30312932 ~ 30313356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678605
aatcgaccatgaaggcctgattcacacagtctcctctgaacagttgatgttgcaatttctgaggctggtaactctaatgaacgtatcctcttcagcagaggtaactctgggtcttcttttcctgtggcggtcctcatgagaggcagtttcatcatagcgcttgatggtttttgcggctgcacaccacccctaccttggcacaacacaactgattggctcaaacgcattaaggtaagaaattacacaaatgaacttttaacaaggcacacctgttaattaaaatgcattccaggagactacctcatgaagctgtttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaaggttggctactttgaagaatctcaaatataaaatatatgtagtgtttttaaacactttttgggttacta

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU678605 True 425 lncRNA 0.42 1 30312932 30313356

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 109606 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 296880 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 329392 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 368253 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 421981 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 148003 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 195905 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 248230 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 310128 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 420227 30733583 ~ 30854816 (+)
G595391 NA non-coding upstream 945 30311690 ~ 30311987 (+)
G595362 NA non-coding upstream 2275 30310003 ~ 30310657 (+)
G595361 NA non-coding upstream 6666 30305106 ~ 30306266 (+)
G595360 NA non-coding upstream 8663 30303638 ~ 30304269 (+)
G595358 NA non-coding upstream 12059 30300593 ~ 30300873 (+)
G595418 NA non-coding downstream 39377 30352733 ~ 30353084 (+)
G595425 NA non-coding downstream 46553 30359909 ~ 30360300 (+)
G595436 NA non-coding downstream 62944 30376300 ~ 30376502 (+)
G595439 NA non-coding downstream 67026 30380382 ~ 30380588 (+)
G595444 NA non-coding downstream 72380 30385736 ~ 30386074 (+)
G593774 LOC106593940 other upstream 280311 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 784022 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 949581 29329584 ~ 29503787 (+)
G593283 NA other upstream 1248340 29059698 ~ 29064592 (+)
G593171 NA other upstream 1420507 28892163 ~ 28892425 (+)
G596168 NA other downstream 589823 30903179 ~ 30903887 (+)
G596297 NA other downstream 768365 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1695958 32007023 ~ 32013203 (+)
G599004 NA other downstream 2922457 33235813 ~ 33236636 (+)
G599123 NA other downstream 2977170 33290526 ~ 33295528 (+)

Expression


Co-expression Network