Gene
RNA
| Item | Value |
|---|---|
| gene id | G595471 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 30328783 ~ 30329035 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU678692 | True | 253 | lncRNA | 0.43 | 1 | 30328783 | 30329035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527624 | LOC106595982 | coding | downstream | 201964 | 30121975 ~ 30126819 (-) |
| LOC110527614 | NA | coding | downstream | 208934 | 30114634 ~ 30119849 (-) |
| LOC118965350 | LOC106593417 | coding | downstream | 300581 | 30026703 ~ 30028202 (-) |
| trnaw-cca-2 | NA | coding | downstream | 438063 | 29890649 ~ 29890720 (-) |
| LOC110527637 | NA | coding | downstream | 490174 | 29833722 ~ 29838609 (-) |
| LOC110527645 | NA | coding | upstream | 256468 | 30585503 ~ 30593851 (-) |
| LOC110527646 | asip | coding | upstream | 275062 | 30604097 ~ 30611268 (-) |
| LOC110528941 | LOC103372673 | coding | upstream | 319954 | 30648989 ~ 30686105 (-) |
| LOC118965351 | NA | coding | upstream | 568892 | 30897927 ~ 30912147 (-) |
| LOC110527649 | myc | coding | upstream | 620442 | 30949477 ~ 30953659 (-) |
| G595468 | NA | non-coding | downstream | 5932 | 30322572 ~ 30322851 (-) |
| LOC110527641 | LOC106582623 | non-coding | downstream | 13044 | 30311282 ~ 30394791 (-) |
| G595363 | NA | non-coding | downstream | 24349 | 30303328 ~ 30304434 (-) |
| G595389 | NA | non-coding | downstream | 27165 | 30301398 ~ 30301618 (-) |
| G595388 | NA | non-coding | downstream | 27802 | 30300753 ~ 30300981 (-) |
| G595476 | NA | non-coding | upstream | 6563 | 30335598 ~ 30336113 (-) |
| G595486 | NA | non-coding | upstream | 29256 | 30358291 ~ 30358521 (-) |
| G595778 | NA | non-coding | upstream | 91314 | 30420349 ~ 30420631 (-) |
| G595792 | NA | non-coding | upstream | 106026 | 30435061 ~ 30435277 (-) |
| G595796 | NA | non-coding | upstream | 110433 | 30439468 ~ 30439698 (-) |
| G595364 | NA | other | downstream | 17849 | 30310171 ~ 30310934 (-) |
| G595022 | NA | other | downstream | 499218 | 29827953 ~ 29829565 (-) |
| G594968 | LOC106591690 | other | downstream | 601293 | 29721676 ~ 29727490 (-) |
| G594905 | NA | other | downstream | 702884 | 29589993 ~ 29625899 (-) |
| G596094 | NA | other | upstream | 515146 | 30844181 ~ 30844624 (-) |
| G596039 | NA | other | upstream | 533822 | 30862857 ~ 30863320 (-) |
| G596352 | NA | other | upstream | 607130 | 30936165 ~ 30936614 (-) |
| G596433 | NA | other | upstream | 749477 | 31078512 ~ 31079318 (-) |
