G595444


Basic Information

Item Value
gene id G595444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30385736 ~ 30386074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678657
GGAAGAATGTGGCCttttataaatgcatttcatGCAATACTATGTCATTTTCCATGACTGGCTACTTTGGcagaatattttttaatacaGCAGAAATGAtcgaaatgacaggctactttgacagtgacaaactgagaatctgagatcaataaaaactaCCTTGTCtcgaatccatcaatagcctaggcctaggtgtgtggagacatgttgtaggctacaatatgaggaggaaattatagtcctaaaaatACTTTCCAGTTTCACTGGCCCACTCGCTGACgcgttttactttgtaaaacaatatttggaagttgatcaaatattttcgTAGTCTACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678657 True 339 lncRNA 0.37 1 30385736 30386074

Neighbor

gene id symbol gene type direction distance location
LOC110527639 NA coding upstream 182410 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 369684 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 402196 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 441057 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 494785 29890879 ~ 29890951 (+)
LOC110527642 cssa12h20orf85 coding downstream 75285 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 123187 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 175512 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 237410 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 347509 30733583 ~ 30854816 (+)
G595439 NA non-coding upstream 5148 30380382 ~ 30380588 (+)
G595436 NA non-coding upstream 9234 30376300 ~ 30376502 (+)
G595425 NA non-coding upstream 25436 30359909 ~ 30360300 (+)
G595418 NA non-coding upstream 32652 30352733 ~ 30353084 (+)
G595392 NA non-coding upstream 72380 30312932 ~ 30313356 (+)
G595506 NA non-coding downstream 27010 30413084 ~ 30413310 (+)
G595566 NA non-coding downstream 108760 30494834 ~ 30495053 (+)
G595567 NA non-coding downstream 109544 30495618 ~ 30522075 (+)
G595568 NA non-coding downstream 109961 30496035 ~ 30522317 (+)
G595586 NA non-coding downstream 144406 30530480 ~ 30532330 (+)
G593774 LOC106593940 other upstream 353115 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 856826 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1022385 29329584 ~ 29503787 (+)
G593283 NA other upstream 1321144 29059698 ~ 29064592 (+)
G593171 NA other upstream 1493311 28892163 ~ 28892425 (+)
G596168 NA other downstream 517105 30903179 ~ 30903887 (+)
G596297 NA other downstream 695647 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1623240 32007023 ~ 32013203 (+)
G599004 NA other downstream 2849739 33235813 ~ 33236636 (+)
G599123 NA other downstream 2904452 33290526 ~ 33295528 (+)

Expression


Co-expression Network