Gene
RNA
| Item | Value |
|---|---|
| gene id | G595798 |
| gene name | LOC106583515 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 30441077 ~ 30441455 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU679032 | True | 379 | lncRNA | 0.47 | 1 | 30441077 | 30441455 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527641 | LOC106582623 | coding | downstream | 46286 | 30311282 ~ 30394791 (-) |
| LOC110527624 | LOC106595982 | coding | downstream | 314258 | 30121975 ~ 30126819 (-) |
| LOC110527614 | NA | coding | downstream | 321228 | 30114634 ~ 30119849 (-) |
| LOC118965350 | LOC106593417 | coding | downstream | 412875 | 30026703 ~ 30028202 (-) |
| trnaw-cca-2 | NA | coding | downstream | 550357 | 29890649 ~ 29890720 (-) |
| LOC110527645 | NA | coding | upstream | 144048 | 30585503 ~ 30593851 (-) |
| LOC110527646 | asip | coding | upstream | 162642 | 30604097 ~ 30611268 (-) |
| LOC110528941 | LOC103372673 | coding | upstream | 207534 | 30648989 ~ 30686105 (-) |
| LOC118965351 | NA | coding | upstream | 456472 | 30897927 ~ 30912147 (-) |
| LOC110527649 | myc | coding | upstream | 508022 | 30949477 ~ 30953659 (-) |
| G595796 | NA | non-coding | downstream | 1379 | 30439468 ~ 30439698 (-) |
| G595792 | NA | non-coding | downstream | 5800 | 30435061 ~ 30435277 (-) |
| G595778 | NA | non-coding | downstream | 20446 | 30420349 ~ 30420631 (-) |
| G595486 | NA | non-coding | downstream | 82556 | 30358291 ~ 30358521 (-) |
| G595476 | NA | non-coding | downstream | 104964 | 30335598 ~ 30336113 (-) |
| G595820 | NA | non-coding | upstream | 21214 | 30462669 ~ 30492735 (-) |
| G595841 | NA | non-coding | upstream | 53541 | 30494996 ~ 30495223 (-) |
| G595876 | NA | non-coding | upstream | 97411 | 30538866 ~ 30539591 (-) |
| G595879 | NA | non-coding | upstream | 101342 | 30542797 ~ 30543015 (-) |
| G595853 | LOC104945811 | non-coding | upstream | 134662 | 30576117 ~ 30578870 (-) |
| G595364 | NA | other | downstream | 130143 | 30310171 ~ 30310934 (-) |
| G595022 | NA | other | downstream | 611512 | 29827953 ~ 29829565 (-) |
| G594968 | LOC106591690 | other | downstream | 713587 | 29721676 ~ 29727490 (-) |
| G594905 | NA | other | downstream | 815178 | 29589993 ~ 29625899 (-) |
| G596094 | NA | other | upstream | 402726 | 30844181 ~ 30844624 (-) |
| G596039 | NA | other | upstream | 421402 | 30862857 ~ 30863320 (-) |
| G596352 | NA | other | upstream | 494710 | 30936165 ~ 30936614 (-) |
| G596433 | NA | other | upstream | 637057 | 31078512 ~ 31079318 (-) |
