G595586


Basic Information

Item Value
gene id G595586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30530480 ~ 30532330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678809
cttCTGTGTTGCATTTGAGTATATGCAATGTCCCCATGCAcaatttacataaatacaaagTAGACAGTGATAGTAATTGCAATGATCCCAACAATTTACATGAATACAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTCTTGCATAGGAGTGTATAGTGTTTCTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678809 True 219 lncRNA 0.40 2 30530480 30532330

Neighbor

gene id symbol gene type direction distance location
LOC110527642 cssa12h20orf85 coding upstream 30921 30461359 ~ 30499559 (+)
LOC110527639 NA coding upstream 327154 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 514428 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 546940 29974966 ~ 29983540 (+)
LOC110528937 NA coding upstream 585801 29931825 ~ 29944679 (+)
LOC110527644 sahhb coding downstream 29256 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 91154 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 201253 30733583 ~ 30854816 (+)
LOC118965377 NA coding downstream 520296 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 539412 31071742 ~ 31073140 (+)
G595568 NA non-coding upstream 8163 30496035 ~ 30522317 (+)
G595567 NA non-coding upstream 8405 30495618 ~ 30522075 (+)
G595566 NA non-coding upstream 35427 30494834 ~ 30495053 (+)
G595506 NA non-coding upstream 117170 30413084 ~ 30413310 (+)
G595444 NA non-coding upstream 144406 30385736 ~ 30386074 (+)
G595588 NA non-coding downstream 7139 30539469 ~ 30539676 (+)
G595593 NA non-coding downstream 13677 30546007 ~ 30546444 (+)
G595599 NA non-coding downstream 19277 30551607 ~ 30551813 (+)
G595603 NA non-coding downstream 24957 30557287 ~ 30557520 (+)
G595612 NA non-coding downstream 50672 30583002 ~ 30583380 (+)
G593774 LOC106593940 other upstream 497859 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1001570 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1167129 29329584 ~ 29503787 (+)
G593283 NA other upstream 1465888 29059698 ~ 29064592 (+)
G593171 NA other upstream 1638055 28892163 ~ 28892425 (+)
G596168 NA other downstream 370849 30903179 ~ 30903887 (+)
G596297 NA other downstream 549391 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1476984 32007023 ~ 32013203 (+)
G599004 NA other downstream 2703483 33235813 ~ 33236636 (+)
G599123 NA other downstream 2758196 33290526 ~ 33295528 (+)

Expression


Co-expression Network