G595593


Basic Information

Item Value
gene id G595593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30546007 ~ 30546444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678816
cctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgtcttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccaatttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678816 True 438 lncRNA 0.49 1 30546007 30546444

Neighbor

gene id symbol gene type direction distance location
LOC110527643 chmp4b coding upstream 9880 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 46448 30461359 ~ 30499559 (+)
LOC110527639 NA coding upstream 342681 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 529955 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 562467 29974966 ~ 29983540 (+)
LOC110527644 sahhb coding downstream 15142 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 77040 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 187139 30733583 ~ 30854816 (+)
LOC118965377 NA coding downstream 506182 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 525298 31071742 ~ 31073140 (+)
G595588 NA non-coding upstream 6331 30539469 ~ 30539676 (+)
G595586 NA non-coding upstream 13677 30530480 ~ 30532330 (+)
G595568 NA non-coding upstream 23690 30496035 ~ 30522317 (+)
G595567 NA non-coding upstream 23932 30495618 ~ 30522075 (+)
G595566 NA non-coding upstream 50954 30494834 ~ 30495053 (+)
G595599 NA non-coding downstream 5163 30551607 ~ 30551813 (+)
G595603 NA non-coding downstream 10843 30557287 ~ 30557520 (+)
G595612 NA non-coding downstream 36558 30583002 ~ 30583380 (+)
G595775 NA non-coding downstream 297108 30843552 ~ 30844716 (+)
G595715 NA non-coding downstream 298406 30844850 ~ 30858694 (+)
G593774 LOC106593940 other upstream 513386 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1017097 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1182656 29329584 ~ 29503787 (+)
G593283 NA other upstream 1481415 29059698 ~ 29064592 (+)
G593171 NA other upstream 1653582 28892163 ~ 28892425 (+)
G596168 NA other downstream 356735 30903179 ~ 30903887 (+)
G596297 NA other downstream 535277 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1462870 32007023 ~ 32013203 (+)
G599004 NA other downstream 2689369 33235813 ~ 33236636 (+)
G599123 NA other downstream 2744082 33290526 ~ 33295528 (+)

Expression


Co-expression Network