G595599


Basic Information

Item Value
gene id G595599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30551607 ~ 30551813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678822
ATAGGCTAATAAAAATACGttgtaaacaaaataataaaggTCTGGtatagggctgtggtggtcacgaAATTtcgtcagctggtgattgtcaagcaaataactgctggtctcaaggtaattgaccattaattaacataaacacatttagcatctcctggcttccacagcttataagccactgatgcagaccatTTTAACAAGTCTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678822 True 207 lncRNA 0.37 1 30551607 30551813

Neighbor

gene id symbol gene type direction distance location
LOC110527643 chmp4b coding upstream 15480 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 52048 30461359 ~ 30499559 (+)
LOC110527639 NA coding upstream 348281 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 535555 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 568067 29974966 ~ 29983540 (+)
LOC110527644 sahhb coding downstream 9773 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 71671 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 181770 30733583 ~ 30854816 (+)
LOC118965377 NA coding downstream 500813 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 519929 31071742 ~ 31073140 (+)
G595593 NA non-coding upstream 5163 30546007 ~ 30546444 (+)
G595588 NA non-coding upstream 11931 30539469 ~ 30539676 (+)
G595586 NA non-coding upstream 19277 30530480 ~ 30532330 (+)
G595568 NA non-coding upstream 29290 30496035 ~ 30522317 (+)
G595567 NA non-coding upstream 29532 30495618 ~ 30522075 (+)
G595603 NA non-coding downstream 5474 30557287 ~ 30557520 (+)
G595612 NA non-coding downstream 31189 30583002 ~ 30583380 (+)
G595775 NA non-coding downstream 291739 30843552 ~ 30844716 (+)
G595715 NA non-coding downstream 293037 30844850 ~ 30858694 (+)
G596127 NA non-coding downstream 324107 30875920 ~ 30876207 (+)
G593774 LOC106593940 other upstream 518986 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1022697 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1188256 29329584 ~ 29503787 (+)
G593283 NA other upstream 1487015 29059698 ~ 29064592 (+)
G593171 NA other upstream 1659182 28892163 ~ 28892425 (+)
G596168 NA other downstream 351366 30903179 ~ 30903887 (+)
G596297 NA other downstream 529908 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1457501 32007023 ~ 32013203 (+)
G599004 NA other downstream 2684000 33235813 ~ 33236636 (+)
G599123 NA other downstream 2738713 33290526 ~ 33295528 (+)

Expression


Co-expression Network