G595603


Basic Information

Item Value
gene id G595603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30557287 ~ 30557520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU678826
actaaacagtcccatggaatttgactgccttcatgacttgtGACCTCCGGTTTggcagtaatacggtcaccataacagccctagtctggtaGCCTCAATAGACAAAGATTTGAAGTTGAACAAGTCGTTGcatgtagattttttttaaacttgacttgagacttgattTAAATTTGTGACTCGACTCAACTTGACCATAGAATGCACGACTTGGATTTAACTCCAGTTTTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU678826 True 234 lncRNA 0.40 1 30557287 30557520

Neighbor

gene id symbol gene type direction distance location
LOC110527643 chmp4b coding upstream 21160 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 57728 30461359 ~ 30499559 (+)
LOC110527639 NA coding upstream 353961 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 541235 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 573747 29974966 ~ 29983540 (+)
LOC110527644 sahhb coding downstream 4066 30561586 ~ 30578870 (+)
if2b LOC106582627 coding downstream 65964 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 176063 30733583 ~ 30854816 (+)
LOC118965377 NA coding downstream 495106 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 514222 31071742 ~ 31073140 (+)
G595599 NA non-coding upstream 5474 30551607 ~ 30551813 (+)
G595593 NA non-coding upstream 10843 30546007 ~ 30546444 (+)
G595588 NA non-coding upstream 17611 30539469 ~ 30539676 (+)
G595586 NA non-coding upstream 24957 30530480 ~ 30532330 (+)
G595568 NA non-coding upstream 34970 30496035 ~ 30522317 (+)
G595612 NA non-coding downstream 25482 30583002 ~ 30583380 (+)
G595775 NA non-coding downstream 286032 30843552 ~ 30844716 (+)
G595715 NA non-coding downstream 287330 30844850 ~ 30858694 (+)
G596127 NA non-coding downstream 318400 30875920 ~ 30876207 (+)
G596131 NA non-coding downstream 320770 30878290 ~ 30878683 (+)
G593774 LOC106593940 other upstream 524666 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1028377 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1193936 29329584 ~ 29503787 (+)
G593283 NA other upstream 1492695 29059698 ~ 29064592 (+)
G593171 NA other upstream 1664862 28892163 ~ 28892425 (+)
G596168 NA other downstream 345659 30903179 ~ 30903887 (+)
G596297 NA other downstream 524201 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1451794 32007023 ~ 32013203 (+)
G599004 NA other downstream 2678293 33235813 ~ 33236636 (+)
G599123 NA other downstream 2733006 33290526 ~ 33295528 (+)

Expression


Co-expression Network