G595853 (LOC104945811)


Basic Information

Item Value
gene id G595853
gene name LOC104945811
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30576117 ~ 30578870 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679095
TAAAATTGTATCTTTATTGCATCACATTTCACAACAGTGCAAGTACTGTAGGAAATGCAACACTTGGGATTAACAATGTAACCGTTAAACATGGCAGTATATGTTCGACCAGACCACAGCCCATTCCGTCACAGCTCAGCTAAGAAAACAGAACAGGAAAGCACTTGGATGTTTCCTGTCCCTTCAGACAGAATCCTAGACTTACAAAATAAGCAAATGGGGAAACTGAGTGTGTTCTTTAAGCCAGGCTTTGGTGGTACGTCAGAGTTTCTCCATAAGACAATGATATGAAACCAGCACTTATTGCCATATTAGCTATGGTGTATATGTAAACTTGAATAGTATGGGGATTTAACTAAAAGCATCACGTTTTTTCCATGATCAAAGAGGGAATGCAATTTATAACAAGAATAGTGCCTTTAGAAGCCACTTAGCACTTGTTGCTGTAAAGGCGAAGGAGCTCTGGTTGGAATCTAAAAGGTATGTAGAATGGGCAAGACAGTTTAAAGGGTAGTTGAAGCAAAATGTCCTAACCTCCAAAAGACTTGTGGGAATCTTGGCCTACCCAAACCCACGAGTCCATGCGCCACCATACCACCATCAGACCCCCACCATGAGTCTGGGCCGCTGCTTGGCCACCTTCCTGACATTTCTCAATAGCGGTAATGGTCAGGCTTGAAGGGTCCTTCGCGGGGCAGTCCCAGGTATTTGGCCTGCTTATCTGAAAGCTTGGTCAGCTTGACGCCGAGCTTCTCAATCTGGGCCAACACCTGGTTGGTGAAGGAGTTGCTCATGACAAAGCTGGGGTGACCCATGGCACAGCCCAGATTAACCAATCTGCCCTCAGCCAGCACAATGATGTGGCGGCCATTCTTCATGCGGTAACGGTCCACCTGGCGGGAGGAGAACTGTGGCTTGATGTTTATCTTCTCGGCTGCGTTGGCATTGAGCCAGTTCATGTCTATCTCACAGTCGAAGTGGCCGATGTTGCAAACGATGGAGTCGTCTTTCATGTGCTCAAAGTGTCTGGGGAACACACCAGTGTACACATCAATGGCCTGTTGTAGACACCGCAGCAGTTGCATTTCAGAGAAGAATGCCGTTGCCCCTAAACTCAGAAAtgtctacaggttatagaaaaatGATCCTGAGTTTCCCCACTTGAAAGAATCAAAATCAACCAATAGGAAACTACTTATAACGTCATGTTAAAACTCAGATTCCCAGTTTGACGGCACGTGAATGCAGCATCAGGTCAGCTTTAAGTTTCCTCCACTAATGGGAAGGGTTATAGGCTAGTGGCGAATCTTCAAGAAGGATTGG

Function

NR:

description
adenosylhomocysteinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679095 True 1323 lncRNA 0.46 3 30576117 30578870

Neighbor

gene id symbol gene type direction distance location
LOC110527641 LOC106582623 coding downstream 181326 30311282 ~ 30394791 (-)
LOC110527624 LOC106595982 coding downstream 449298 30121975 ~ 30126819 (-)
LOC110527614 NA coding downstream 456268 30114634 ~ 30119849 (-)
LOC118965350 LOC106593417 coding downstream 547915 30026703 ~ 30028202 (-)
trnaw-cca-2 NA coding downstream 685397 29890649 ~ 29890720 (-)
LOC110527645 NA coding upstream 6633 30585503 ~ 30593851 (-)
LOC110527646 asip coding upstream 25227 30604097 ~ 30611268 (-)
LOC110528941 LOC103372673 coding upstream 70119 30648989 ~ 30686105 (-)
LOC118965351 NA coding upstream 319057 30897927 ~ 30912147 (-)
LOC110527649 myc coding upstream 370607 30949477 ~ 30953659 (-)
G595879 NA non-coding downstream 33102 30542797 ~ 30543015 (-)
G595876 NA non-coding downstream 36526 30538866 ~ 30539591 (-)
G595841 NA non-coding downstream 80894 30494996 ~ 30495223 (-)
G595820 NA non-coding downstream 83382 30462669 ~ 30492735 (-)
G595798 LOC106583515 non-coding downstream 134662 30441077 ~ 30441455 (-)
G595887 NA non-coding upstream 838 30579708 ~ 30579919 (-)
G595888 NA non-coding upstream 1947 30580817 ~ 30581031 (-)
G595899 NA non-coding upstream 16183 30595053 ~ 30596158 (-)
G595915 NA non-coding upstream 44614 30623484 ~ 30626714 (-)
G595918 NA non-coding upstream 54504 30633374 ~ 30633891 (-)
G595364 NA other downstream 265183 30310171 ~ 30310934 (-)
G595022 NA other downstream 746552 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 848627 29721676 ~ 29727490 (-)
G594905 NA other downstream 950218 29589993 ~ 29625899 (-)
G596094 NA other upstream 265311 30844181 ~ 30844624 (-)
G596039 NA other upstream 283987 30862857 ~ 30863320 (-)
G596352 NA other upstream 357295 30936165 ~ 30936614 (-)
G596433 NA other upstream 499642 31078512 ~ 31079318 (-)

Expression


Co-expression Network