G595899


Basic Information

Item Value
gene id G595899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30595053 ~ 30596158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679145
aataaatgcgctaacatttctaaaaacctgtttttacatTGTCatcatggtgtattgtgtgtagataggtgagaAAGAATCTTTCAATAAATGTTTTTCAGGGATTTTGGTGGGAATTCAATTATCGGTAACAcattacttgacacccagtgtcataacacGGCCATAACCATTTTATAATATGTCATAATAGCTTACATAACTTGTCAGAACCATTTATTGATAGACCAATACATTTACCCTGTTGTGACATACAgtgtattgtgttattttacagctggctatgacacctacataagtgtgtcaaaacccacatttattcaaataATTGTTTTCCCTGCCAAGAAGTTCTCTTTCATTTTaaagtttgtttcttaaatcCTTTGTTGTCGTTGTAACGAATTCTTTACAGTCATGttttttttcatcatattttaaataacaGTGCCATGAAgcattatggccttcctgtgtcactttacttggactgaGAAAATGCACTTTATGACaatgtcaagaagcattatgaccatcatattGATATAAGACAGACAGGCCTATCACATGCATTCCCTTATATCAGTCAcaaaagagggtgtcttgtcctgctcctgaaatctgctcctgcattcatcccagtcatcagtcaaaaagaaGGCGTCTTGTCCtactcctgaaatctgctcctgcattcatcccagtcatcagtcaaaaagaaggtgtcttgtcctgctcctgaaatctgctccggCATTCCtcccagtcatcagtcaaaagagggtgtcttgtcctgctcctgaaatctgctcctgcattcatcacAGTCATCAGTCagaaagagggtgtcttgtcctgctcctgataTCTGCTCCGGCATTCATCCatcatcagcaacagagcattgaGGTGGGTCCATGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679145 True 920 lncRNA 0.39 2 30595053 30596158

Neighbor

gene id symbol gene type direction distance location
LOC110527645 NA coding downstream 1202 30585503 ~ 30593851 (-)
LOC110527641 LOC106582623 coding downstream 200262 30311282 ~ 30394791 (-)
LOC110527624 LOC106595982 coding downstream 468234 30121975 ~ 30126819 (-)
LOC110527614 NA coding downstream 475204 30114634 ~ 30119849 (-)
LOC118965350 LOC106593417 coding downstream 566851 30026703 ~ 30028202 (-)
LOC110527646 asip coding upstream 7939 30604097 ~ 30611268 (-)
LOC110528941 LOC103372673 coding upstream 52831 30648989 ~ 30686105 (-)
LOC118965351 NA coding upstream 301769 30897927 ~ 30912147 (-)
LOC110527649 myc coding upstream 353319 30949477 ~ 30953659 (-)
LOC110527650 ergi3 coding upstream 393701 30989859 ~ 31005163 (-)
G595888 NA non-coding downstream 14022 30580817 ~ 30581031 (-)
G595887 NA non-coding downstream 15134 30579708 ~ 30579919 (-)
G595853 LOC104945811 non-coding downstream 16183 30576117 ~ 30578870 (-)
G595879 NA non-coding downstream 52038 30542797 ~ 30543015 (-)
G595876 NA non-coding downstream 55462 30538866 ~ 30539591 (-)
G595915 NA non-coding upstream 27326 30623484 ~ 30626714 (-)
G595918 NA non-coding upstream 37216 30633374 ~ 30633891 (-)
G595917 LOC106582627 non-coding upstream 38342 30634500 ~ 30636019 (-)
G596105 NA non-coding upstream 267492 30863650 ~ 30863858 (-)
G596115 NA non-coding upstream 271236 30867394 ~ 30867610 (-)
G595364 NA other downstream 284119 30310171 ~ 30310934 (-)
G595022 NA other downstream 765488 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 867563 29721676 ~ 29727490 (-)
G594905 NA other downstream 969154 29589993 ~ 29625899 (-)
G596094 NA other upstream 248023 30844181 ~ 30844624 (-)
G596039 NA other upstream 266699 30862857 ~ 30863320 (-)
G596352 NA other upstream 340007 30936165 ~ 30936614 (-)
G596433 NA other upstream 482354 31078512 ~ 31079318 (-)

Expression


Co-expression Network