G596127


Basic Information

Item Value
gene id G596127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30875920 ~ 30876207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679383
ataatgggacccatcttGTCTAAAAAGTCAACTCAAGTTTGACAAAAAGCACctggaagcacctggatgatcacaAAGACTCTTGGAATAATGTTCTATGGACAGGTGACTCAAAAGTATAACTTTTGGGACATGGGTcccatatatatgtatatttatacaACAGGTTGGTCCAATCCTGAAtgatgattggttaaaaccgcattccagccggtgtctattccacaagttaccaccggctaaatctgaCATTAAAtagcctatttactctgttctatCTGACTAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679383 True 288 lncRNA 0.39 1 30875920 30876207

Neighbor

gene id symbol gene type direction distance location
LOC110527647 LOC106582629 coding upstream 21104 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 239912 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 297050 30561586 ~ 30578870 (+)
LOC110527643 chmp4b coding upstream 339793 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 376361 30461359 ~ 30499559 (+)
LOC118965377 NA coding downstream 176419 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 195535 31071742 ~ 31073140 (+)
LOC118965379 NA coding downstream 197138 31073345 ~ 31074263 (+)
LOC110527653 LOC106582631 coding downstream 328297 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 1130816 32007023 ~ 32013203 (+)
G595715 NA non-coding upstream 17226 30844850 ~ 30858694 (+)
G595775 NA non-coding upstream 31204 30843552 ~ 30844716 (+)
G595612 NA non-coding upstream 292540 30583002 ~ 30583380 (+)
G595603 NA non-coding upstream 318400 30557287 ~ 30557520 (+)
G595599 NA non-coding upstream 324107 30551607 ~ 30551813 (+)
G596131 NA non-coding downstream 2083 30878290 ~ 30878683 (+)
G596142 NA non-coding downstream 8583 30884790 ~ 30885010 (+)
G596150 NA non-coding downstream 16158 30892365 ~ 30892638 (+)
G596157 NA non-coding downstream 21316 30897523 ~ 30897775 (+)
G596160 NA non-coding downstream 23000 30899207 ~ 30899519 (+)
G593774 LOC106593940 other upstream 843299 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1347010 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1512569 29329584 ~ 29503787 (+)
G593283 NA other upstream 1811328 29059698 ~ 29064592 (+)
G593171 NA other upstream 1983495 28892163 ~ 28892425 (+)
G596168 NA other downstream 26972 30903179 ~ 30903887 (+)
G596297 NA other downstream 205514 31081721 ~ 31082290 (+)
G599004 NA other downstream 2359606 33235813 ~ 33236636 (+)
G599123 NA other downstream 2414319 33290526 ~ 33295528 (+)

Expression


Co-expression Network