G596150


Basic Information

Item Value
gene id G596150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30892365 ~ 30892638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679408
ctcgaacatggaaacccatttcatgaagctcctgactgTGGTGAAACATTTATTTACAGTTTCTTACTACACCTACTACCACAAATATGTTATGGCCTGGTCATGCCACAGCTGTAAATATATGAGTCATTTGGAGTATGTTTTtgtatacattaccagtcaaaagtttggacacactgactcattccagggtttttctttatttttattattttctaaattgtagaataatagtgaagacatcaaaactatgaaataacacatggaattatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679408 True 274 lncRNA 0.33 1 30892365 30892638

Neighbor

gene id symbol gene type direction distance location
LOC110527647 LOC106582629 coding upstream 37549 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 256357 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 313495 30561586 ~ 30578870 (+)
LOC110527643 chmp4b coding upstream 356238 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 392806 30461359 ~ 30499559 (+)
LOC118965377 NA coding downstream 159988 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 179104 31071742 ~ 31073140 (+)
LOC118965379 NA coding downstream 180707 31073345 ~ 31074263 (+)
LOC110527653 LOC106582631 coding downstream 311866 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 1114385 32007023 ~ 32013203 (+)
G596142 NA non-coding upstream 7355 30884790 ~ 30885010 (+)
G596131 NA non-coding upstream 13682 30878290 ~ 30878683 (+)
G596127 NA non-coding upstream 16158 30875920 ~ 30876207 (+)
G595715 NA non-coding upstream 33671 30844850 ~ 30858694 (+)
G595775 NA non-coding upstream 47649 30843552 ~ 30844716 (+)
G596157 NA non-coding downstream 4885 30897523 ~ 30897775 (+)
G596160 NA non-coding downstream 6569 30899207 ~ 30899519 (+)
G596163 NA non-coding downstream 7858 30900496 ~ 30900944 (+)
G596165 NA non-coding downstream 9365 30902003 ~ 30902248 (+)
G596184 NA non-coding downstream 22611 30915249 ~ 30915450 (+)
G593774 LOC106593940 other upstream 859744 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1363455 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1529014 29329584 ~ 29503787 (+)
G593283 NA other upstream 1827773 29059698 ~ 29064592 (+)
G593171 NA other upstream 1999940 28892163 ~ 28892425 (+)
G596168 NA other downstream 10541 30903179 ~ 30903887 (+)
G596297 NA other downstream 189083 31081721 ~ 31082290 (+)
G599004 NA other downstream 2343175 33235813 ~ 33236636 (+)
G599123 NA other downstream 2397888 33290526 ~ 33295528 (+)

Expression


Co-expression Network