G596165


Basic Information

Item Value
gene id G596165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30902003 ~ 30902248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679423
gctaGTGCTCCCCCATGCCGTCCCTACGAGGGGTGCATCACGTCTTGCCAGGATTGTTTTGCTATTCTCGACTTGAGTAGGTTGAGTCACTGATATTAACTTCCTGTCCGGTCTTGCGCCCCCTCAGGCTCGTgtggtgggggagatctttgtgggcaatACTCCAcattgtctcagggtagtaagttggtggactgttgatatccctctaggggTGTGGGGGCTGTGGTTGGCCCAGTACTTGag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679423 True 246 lncRNA 0.54 1 30902003 30902248

Neighbor

gene id symbol gene type direction distance location
LOC110527647 LOC106582629 coding upstream 47187 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 265995 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 323133 30561586 ~ 30578870 (+)
LOC110527643 chmp4b coding upstream 365876 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 402444 30461359 ~ 30499559 (+)
LOC118965377 NA coding downstream 150378 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 169494 31071742 ~ 31073140 (+)
LOC118965379 NA coding downstream 171097 31073345 ~ 31074263 (+)
LOC110527653 LOC106582631 coding downstream 302256 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 1104775 32007023 ~ 32013203 (+)
G596163 NA non-coding upstream 1059 30900496 ~ 30900944 (+)
G596160 NA non-coding upstream 2484 30899207 ~ 30899519 (+)
G596157 NA non-coding upstream 4228 30897523 ~ 30897775 (+)
G596150 NA non-coding upstream 9365 30892365 ~ 30892638 (+)
G596142 NA non-coding upstream 16993 30884790 ~ 30885010 (+)
G596184 NA non-coding downstream 13001 30915249 ~ 30915450 (+)
G596207 NA non-coding downstream 33937 30936185 ~ 30936449 (+)
G596197 NA non-coding downstream 87624 30989872 ~ 30992267 (+)
G596265 NA non-coding downstream 122373 31024621 ~ 31025043 (+)
G596327 NA non-coding downstream 225073 31127321 ~ 31132421 (+)
G593774 LOC106593940 other upstream 869382 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1373093 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1538652 29329584 ~ 29503787 (+)
G593283 NA other upstream 1837411 29059698 ~ 29064592 (+)
G593171 NA other upstream 2009578 28892163 ~ 28892425 (+)
G596168 NA other downstream 931 30903179 ~ 30903887 (+)
G596297 NA other downstream 179473 31081721 ~ 31082290 (+)
G599004 NA other downstream 2333565 33235813 ~ 33236636 (+)
G599123 NA other downstream 2388278 33290526 ~ 33295528 (+)

Expression


Co-expression Network