G596297


Basic Information

Item Value
gene id G596297
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31081721 ~ 31082290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679558
aggaatgtccaccagagcggttgccataaaatgtaatgttaatttctccaccaacgtcgttttagagaatttggcagcacgtccaaccagcctcacaaccacgtgtaaccacgccagcccaggaactccacatccggcttcttcacctgtgggatcgtccgAGACCAGCCACATATGGGCATATGTTactgacaacgaacacaattgcattttattgttgCCAATTTGAatacagagatactgtgacaagatccttatgcccattgttgtgccattcatccgccgccataacttcatgtttcagtatgataatgcacgTCCCCTTGTTGCaggaatctgtacacaattcctggaagctgaaaatgtcccagttcttccatggcctacatactcaccagacatgttacccattgagcatgtttgggatgctctggatcgacgtgcatgacagcgtgttccagagtagTGTAAAGAAGATGTTTCGctctgcatgaggaaaatggtgatcacaccagataccgactgttTTTTTGATCCTCGt

Function

NR:

description
Transposable element Tc3 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679558 True 541 TUCP 0.46 2 31081721 31082290

Neighbor

gene id symbol gene type direction distance location
LOC118965379 NA coding upstream 7458 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 8581 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 10103 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 226905 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 445713 30623484 ~ 30636008 (+)
LOC110527653 LOC106582631 coding downstream 122214 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 924733 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 1114676 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 1263358 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 1385723 32468013 ~ 32480794 (+)
G596265 NA non-coding upstream 56678 31024621 ~ 31025043 (+)
G596197 NA non-coding upstream 89454 30989872 ~ 30992267 (+)
G596207 NA non-coding upstream 145272 30936185 ~ 30936449 (+)
G596184 NA non-coding upstream 166271 30915249 ~ 30915450 (+)
G596165 NA non-coding upstream 179473 30902003 ~ 30902248 (+)
G596327 NA non-coding downstream 45031 31127321 ~ 31132421 (+)
G596472 NA non-coding downstream 57983 31140273 ~ 31140492 (+)
G596804 NA non-coding downstream 495234 31577524 ~ 31577843 (+)
G596805 NA non-coding downstream 495656 31577946 ~ 31578145 (+)
G596883 NA non-coding downstream 610626 31692916 ~ 31693284 (+)
G596168 NA other upstream 177834 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1049100 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1552811 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1718370 29329584 ~ 29503787 (+)
G593283 NA other upstream 2017129 29059698 ~ 29064592 (+)
G599004 NA other downstream 2153523 33235813 ~ 33236636 (+)
G599123 NA other downstream 2208236 33290526 ~ 33295528 (+)
G600013 NA other downstream 2883999 33966289 ~ 33966755 (+)
G600431 NA other downstream 3677057 34759347 ~ 34759658 (+)

Expression


Co-expression Network