G596327


Basic Information

Item Value
gene id G596327
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31127321 ~ 31132421 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679588
ctaatagtcggcagaacccagaagatgaggcagacacagcagtactagaGACGGTGATTTAataaagaaaaaaggaaaagatcttcaggcaaaaatataaatccacaacatcaaaagtaattccaagagaaAAAATGTATATCCTCCAAGACACAAGGAAAATCCACAAAGTGGTAAGAACAGCAGGGAAAAAAACAAACCTCAAAAGAATAATCAAAAATAAACAAGATCAAAACCAGAGTACCTCAAGAAAATCCAACTAGAGAAACAAAAGTTCACAGCATGGctggggctgggtgctaacatacaaacacagagcaaagaactgaggaacactaagggtttaaatacattcaagggaaatgaggcacaggtgcaactaataactAGAACAAGGGaaaaacaaaagggtcaaaaaagcacaatgggggcatctagtgaccaaaaccTGAACAATCCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679588 True 463 lncRNA 0.38 2 31127321 31132421

Neighbor

gene id symbol gene type direction distance location
LOC118965379 NA coding upstream 53058 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 54181 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 55703 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 272505 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 491313 30623484 ~ 30636008 (+)
LOC110527653 LOC106582631 coding downstream 72083 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 874602 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 1064545 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 1213227 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 1335592 32468013 ~ 32480794 (+)
G596265 NA non-coding upstream 102278 31024621 ~ 31025043 (+)
G596197 NA non-coding upstream 135054 30989872 ~ 30992267 (+)
G596207 NA non-coding upstream 190872 30936185 ~ 30936449 (+)
G596184 NA non-coding upstream 211871 30915249 ~ 30915450 (+)
G596165 NA non-coding upstream 225073 30902003 ~ 30902248 (+)
G596472 NA non-coding downstream 7852 31140273 ~ 31140492 (+)
G596804 NA non-coding downstream 445103 31577524 ~ 31577843 (+)
G596805 NA non-coding downstream 445525 31577946 ~ 31578145 (+)
G596883 NA non-coding downstream 560495 31692916 ~ 31693284 (+)
G596899 NA non-coding downstream 595241 31727662 ~ 31785112 (+)
G596297 NA other upstream 45031 31081721 ~ 31082290 (+)
G596168 NA other upstream 223434 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1094700 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1598411 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1763970 29329584 ~ 29503787 (+)
G599004 NA other downstream 2103392 33235813 ~ 33236636 (+)
G599123 NA other downstream 2158105 33290526 ~ 33295528 (+)
G600013 NA other downstream 2833868 33966289 ~ 33966755 (+)
G600431 NA other downstream 3626926 34759347 ~ 34759658 (+)

Expression


Co-expression Network