G596804


Basic Information

Item Value
gene id G596804
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31577524 ~ 31577843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU680074
ctaccaccacaatgcttcactttAGGGATGGTgcaaagtttcctccagacgtgacgcttggcattgaggccaaagagttcaatattggtttcatcagacgagaaaatcttgtttctcatggtctgagtgtctttaggtgccttttggcaaactcatagTGTAACAGATGTTAAAGTActatgtgaatttcaccaggttcatatatGAATATGTCATGTTGATTTGTTAttatgcatgcctgcatcctgggagTAGGGGAGTGTATACTTACGTTTTGCCCTGCGTGCTTGTGCTCAAATTATTTTGATGCACTATGAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU680074 True 320 lncRNA 0.41 1 31577524 31577843

Neighbor

gene id symbol gene type direction distance location
LOC118965379 NA coding upstream 503261 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 504384 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 505906 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 722708 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 941516 30623484 ~ 30636008 (+)
LOC110531742 LOC106594194 coding downstream 429180 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 619123 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 767805 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 890170 32468013 ~ 32480794 (+)
rbm12 rbm12 coding downstream 903093 32480936 ~ 32492404 (+)
G596472 NA non-coding upstream 437032 31140273 ~ 31140492 (+)
G596327 NA non-coding upstream 445103 31127321 ~ 31132421 (+)
G596265 NA non-coding upstream 552481 31024621 ~ 31025043 (+)
G596197 NA non-coding upstream 585257 30989872 ~ 30992267 (+)
G596207 NA non-coding upstream 641075 30936185 ~ 30936449 (+)
G596805 NA non-coding downstream 103 31577946 ~ 31578145 (+)
G596883 NA non-coding downstream 115073 31692916 ~ 31693284 (+)
G596899 NA non-coding downstream 149819 31727662 ~ 31785112 (+)
G597554 NA non-coding downstream 360359 31938202 ~ 31938490 (+)
G597555 NA non-coding downstream 368633 31946476 ~ 31946712 (+)
G596297 NA other upstream 495234 31081721 ~ 31082290 (+)
G596168 NA other upstream 673637 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1544903 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 2048614 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 2214173 29329584 ~ 29503787 (+)
G599004 NA other downstream 1657970 33235813 ~ 33236636 (+)
G599123 NA other downstream 1712683 33290526 ~ 33295528 (+)
G600013 NA other downstream 2388446 33966289 ~ 33966755 (+)
G600431 NA other downstream 3181504 34759347 ~ 34759658 (+)

Expression


Co-expression Network