G597329



Basic Information


Item Value
gene id G597329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31585757 ~ 31585995 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU680611
gtgcccaagaacactaaggtaacctgcctaaatgactaccgacctgtagcactcacatctcactcacatctgtagccatgaaatgctttgaaaggctggtcatggctcacaacaacatgatcccagaaaccctagacccactccaatttgaataccacaccaacagatccacagatgatgcaatcgctattgcactccacactgccctttcacacttggacaaaaggaacacctatgtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU680611 True 239 lncRNA 0.47 1 31585757 31585995

Neighbor


gene id symbol gene type direction distance location
LOC110527652 pigu coding downstream 487840 31076887 ~ 31097917 (-)
LOC110527651 LOC106582630 coding downstream 547886 31027318 ~ 31037871 (-)
LOC110527650 ergi3 coding downstream 580594 30989859 ~ 31005163 (-)
LOC110527649 myc coding downstream 632098 30949477 ~ 30953659 (-)
LOC118965351 NA coding downstream 673610 30897927 ~ 30912147 (-)
LOC110527654 LOC106582632 coding upstream 489887 32075882 ~ 32174536 (-)
bc10 bc10 coding upstream 675175 32261170 ~ 32266645 (-)
LOC110527655 tmem74b coding upstream 702169 32288164 ~ 32293251 (-)
psmf1 psmf1 coding upstream 719816 32305811 ~ 32323158 (-)
si:ch211-15p9.2 LOC106582638 coding upstream 835669 32421664 ~ 32424650 (-)
G597326 NA non-coding downstream 1762 31583792 ~ 31583995 (-)
G597314 NA non-coding downstream 12320 31573185 ~ 31573437 (-)
G596495 NA non-coding downstream 426936 31158546 ~ 31158821 (-)
G596471 NA non-coding downstream 445971 31139473 ~ 31139786 (-)
G596441 NA non-coding downstream 478526 31099011 ~ 31107231 (-)
G597337 NA non-coding upstream 7074 31593069 ~ 31593296 (-)
G597339 NA non-coding upstream 10627 31596622 ~ 31596890 (-)
G597345 NA non-coding upstream 17908 31603903 ~ 31604132 (-)
G597347 NA non-coding upstream 19572 31605567 ~ 31606158 (-)
G597349 NA non-coding upstream 20930 31606925 ~ 31607130 (-)
G596433 NA other downstream 506439 31078512 ~ 31079318 (-)
G596352 NA other downstream 649143 30936165 ~ 30936614 (-)
G596039 NA other downstream 722437 30862857 ~ 30863320 (-)
G596094 NA other downstream 741133 30844181 ~ 30844624 (-)
LOC110527646 asip other downstream 974489 30604097 ~ 30611268 (-)
G598354 NA other upstream 832195 32418190 ~ 32420148 (-)
G599058 NA other upstream 1652052 33237359 ~ 33239795 (-)
G599788 NA other upstream 2090084 33674546 ~ 33677297 (-)
LOC110527679 LOC106565035 other upstream 2184055 33770050 ~ 33774908 (-)
G600721 NA other upstream 3028497 34614492 ~ 34614875 (-)

Expression



Co-expression Network