G597349



Basic Information


Item Value
gene id G597349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31606925 ~ 31607130 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU680631
atggtatagagggaaatagtcctataattcctataataactacaacctaaaacttcttaccagggaatattgaagactcatgttaaaaggaaccaccagctttcatatgttctcattcctgagcaaggaactgaaatgttagctttcttacatagcacatattgcacttttattttcttctccaacaatttgtttttgcattattt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU680631 True 206 lncRNA 0.33 1 31606925 31607130

Neighbor


gene id symbol gene type direction distance location
LOC110527652 pigu coding downstream 509008 31076887 ~ 31097917 (-)
LOC110527651 LOC106582630 coding downstream 569054 31027318 ~ 31037871 (-)
LOC110527650 ergi3 coding downstream 601762 30989859 ~ 31005163 (-)
LOC110527649 myc coding downstream 653266 30949477 ~ 30953659 (-)
LOC118965351 NA coding downstream 694778 30897927 ~ 30912147 (-)
LOC110527654 LOC106582632 coding upstream 468752 32075882 ~ 32174536 (-)
bc10 bc10 coding upstream 654040 32261170 ~ 32266645 (-)
LOC110527655 tmem74b coding upstream 681034 32288164 ~ 32293251 (-)
psmf1 psmf1 coding upstream 698681 32305811 ~ 32323158 (-)
si:ch211-15p9.2 LOC106582638 coding upstream 814534 32421664 ~ 32424650 (-)
G597347 NA non-coding downstream 767 31605567 ~ 31606158 (-)
G597345 NA non-coding downstream 2793 31603903 ~ 31604132 (-)
G597339 NA non-coding downstream 10035 31596622 ~ 31596890 (-)
G597337 NA non-coding downstream 13629 31593069 ~ 31593296 (-)
G597329 NA non-coding downstream 20930 31585757 ~ 31585995 (-)
G597383 NA non-coding upstream 55571 31662701 ~ 31663152 (-)
G597384 NA non-coding upstream 56298 31663428 ~ 31664102 (-)
G597395 NA non-coding upstream 72063 31679193 ~ 31679475 (-)
G597400 NA non-coding upstream 77242 31684372 ~ 31684601 (-)
G597402 NA non-coding upstream 79351 31686481 ~ 31687137 (-)
G596433 NA other downstream 527607 31078512 ~ 31079318 (-)
G596352 NA other downstream 670311 30936165 ~ 30936614 (-)
G596039 NA other downstream 743605 30862857 ~ 30863320 (-)
G596094 NA other downstream 762301 30844181 ~ 30844624 (-)
LOC110527646 asip other downstream 995657 30604097 ~ 30611268 (-)
G598354 NA other upstream 811060 32418190 ~ 32420148 (-)
G599058 NA other upstream 1630917 33237359 ~ 33239795 (-)
G599788 NA other upstream 2068949 33674546 ~ 33677297 (-)
LOC110527679 LOC106565035 other upstream 2162920 33770050 ~ 33774908 (-)
G600721 NA other upstream 3007362 34614492 ~ 34614875 (-)

Expression



Co-expression Network