Gene
RNA
| Item | Value |
|---|---|
| gene id | G597402 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 31686481 ~ 31687137 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase T-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU680684 | True | 657 | lncRNA | 0.43 | 1 | 31686481 | 31687137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527652 | pigu | coding | downstream | 588564 | 31076887 ~ 31097917 (-) |
| LOC110527651 | LOC106582630 | coding | downstream | 648610 | 31027318 ~ 31037871 (-) |
| LOC110527650 | ergi3 | coding | downstream | 681318 | 30989859 ~ 31005163 (-) |
| LOC110527649 | myc | coding | downstream | 732822 | 30949477 ~ 30953659 (-) |
| LOC118965351 | NA | coding | downstream | 774334 | 30897927 ~ 30912147 (-) |
| LOC110527654 | LOC106582632 | coding | upstream | 388745 | 32075882 ~ 32174536 (-) |
| bc10 | bc10 | coding | upstream | 574033 | 32261170 ~ 32266645 (-) |
| LOC110527655 | tmem74b | coding | upstream | 601027 | 32288164 ~ 32293251 (-) |
| psmf1 | psmf1 | coding | upstream | 618674 | 32305811 ~ 32323158 (-) |
| si:ch211-15p9.2 | LOC106582638 | coding | upstream | 734527 | 32421664 ~ 32424650 (-) |
| G597400 | NA | non-coding | downstream | 1880 | 31684372 ~ 31684601 (-) |
| G597395 | NA | non-coding | downstream | 7006 | 31679193 ~ 31679475 (-) |
| G597384 | NA | non-coding | downstream | 22379 | 31663428 ~ 31664102 (-) |
| G597383 | NA | non-coding | downstream | 23329 | 31662701 ~ 31663152 (-) |
| G597349 | NA | non-coding | downstream | 79351 | 31606925 ~ 31607130 (-) |
| G597408 | NA | non-coding | upstream | 9316 | 31696453 ~ 31709602 (-) |
| G597461 | NA | non-coding | upstream | 96337 | 31783474 ~ 31797625 (-) |
| G597500 | NA | non-coding | upstream | 165585 | 31852722 ~ 31859864 (-) |
| G597531 | NA | non-coding | upstream | 208600 | 31895737 ~ 31896029 (-) |
| G597533 | NA | non-coding | upstream | 210587 | 31897724 ~ 31898023 (-) |
| G596433 | NA | other | downstream | 607163 | 31078512 ~ 31079318 (-) |
| G596352 | NA | other | downstream | 749867 | 30936165 ~ 30936614 (-) |
| G596039 | NA | other | downstream | 823161 | 30862857 ~ 30863320 (-) |
| G596094 | NA | other | downstream | 841857 | 30844181 ~ 30844624 (-) |
| LOC110527646 | asip | other | downstream | 1075213 | 30604097 ~ 30611268 (-) |
| G598354 | NA | other | upstream | 731053 | 32418190 ~ 32420148 (-) |
| G599058 | NA | other | upstream | 1550910 | 33237359 ~ 33239795 (-) |
| G599788 | NA | other | upstream | 1988942 | 33674546 ~ 33677297 (-) |
| LOC110527679 | LOC106565035 | other | upstream | 2082913 | 33770050 ~ 33774908 (-) |
| G600721 | NA | other | upstream | 2927355 | 34614492 ~ 34614875 (-) |
