Gene
RNA
| Item | Value |
|---|---|
| gene id | G597408 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 31696453 ~ 31709602 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| receptor-type tyrosine-protein phosphatase T-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU680691 | True | 362 | lncRNA | 0.46 | 2 | 31696453 | 31709602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527652 | pigu | coding | downstream | 598536 | 31076887 ~ 31097917 (-) |
| LOC110527651 | LOC106582630 | coding | downstream | 658582 | 31027318 ~ 31037871 (-) |
| LOC110527650 | ergi3 | coding | downstream | 691290 | 30989859 ~ 31005163 (-) |
| LOC110527649 | myc | coding | downstream | 742794 | 30949477 ~ 30953659 (-) |
| LOC118965351 | NA | coding | downstream | 784306 | 30897927 ~ 30912147 (-) |
| LOC110527654 | LOC106582632 | coding | upstream | 366280 | 32075882 ~ 32174536 (-) |
| bc10 | bc10 | coding | upstream | 551568 | 32261170 ~ 32266645 (-) |
| LOC110527655 | tmem74b | coding | upstream | 578562 | 32288164 ~ 32293251 (-) |
| psmf1 | psmf1 | coding | upstream | 596209 | 32305811 ~ 32323158 (-) |
| si:ch211-15p9.2 | LOC106582638 | coding | upstream | 712062 | 32421664 ~ 32424650 (-) |
| G597402 | NA | non-coding | downstream | 9316 | 31686481 ~ 31687137 (-) |
| G597400 | NA | non-coding | downstream | 11852 | 31684372 ~ 31684601 (-) |
| G597395 | NA | non-coding | downstream | 16978 | 31679193 ~ 31679475 (-) |
| G597384 | NA | non-coding | downstream | 32351 | 31663428 ~ 31664102 (-) |
| G597383 | NA | non-coding | downstream | 33301 | 31662701 ~ 31663152 (-) |
| G597461 | NA | non-coding | upstream | 73872 | 31783474 ~ 31797625 (-) |
| G597500 | NA | non-coding | upstream | 143120 | 31852722 ~ 31859864 (-) |
| G597531 | NA | non-coding | upstream | 186135 | 31895737 ~ 31896029 (-) |
| G597533 | NA | non-coding | upstream | 188122 | 31897724 ~ 31898023 (-) |
| G597546 | NA | non-coding | upstream | 199543 | 31909145 ~ 31909637 (-) |
| G596433 | NA | other | downstream | 617135 | 31078512 ~ 31079318 (-) |
| G596352 | NA | other | downstream | 759839 | 30936165 ~ 30936614 (-) |
| G596039 | NA | other | downstream | 833133 | 30862857 ~ 30863320 (-) |
| G596094 | NA | other | downstream | 851829 | 30844181 ~ 30844624 (-) |
| LOC110527646 | asip | other | downstream | 1085185 | 30604097 ~ 30611268 (-) |
| G598354 | NA | other | upstream | 708588 | 32418190 ~ 32420148 (-) |
| G599058 | NA | other | upstream | 1528445 | 33237359 ~ 33239795 (-) |
| G599788 | NA | other | upstream | 1966477 | 33674546 ~ 33677297 (-) |
| LOC110527679 | LOC106565035 | other | upstream | 2060448 | 33770050 ~ 33774908 (-) |
| G600721 | NA | other | upstream | 2904890 | 34614492 ~ 34614875 (-) |
