G597554


Basic Information

Item Value
gene id G597554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31938202 ~ 31938490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU680841
ctccgagagagagaaagaaagaaagagagaaaaagagagagcatacctaaattcacacaggacaccggataagacaggagaaatactccagatataacagactgaccctagccccccgacacataaactactgcagcataaatactggagactgtgacaagaggggtcgggagacactgtggccccgtccgacgatacccccgaacagggccaaacaggcaggatataactgaCCAATGCAGTAGTCCACAGAGTGGTATGAGAAGAGTAACATCCTCCTGCATATCAC

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU680841 True 289 lncRNA 0.49 1 31938202 31938490

Neighbor

gene id symbol gene type direction distance location
LOC110527653 LOC106582631 coding upstream 221975 31204504 ~ 31716227 (+)
LOC118965379 NA coding upstream 863939 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 865062 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 866584 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 1083386 30733583 ~ 30854816 (+)
LOC110531742 LOC106594194 coding downstream 68533 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 258476 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 407158 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 529523 32468013 ~ 32480794 (+)
rbm12 rbm12 coding downstream 542446 32480936 ~ 32492404 (+)
G596899 NA non-coding upstream 153090 31727662 ~ 31785112 (+)
G596883 NA non-coding upstream 244918 31692916 ~ 31693284 (+)
G596805 NA non-coding upstream 360057 31577946 ~ 31578145 (+)
G596804 NA non-coding upstream 360359 31577524 ~ 31577843 (+)
G596472 NA non-coding upstream 797710 31140273 ~ 31140492 (+)
G597555 NA non-coding downstream 7986 31946476 ~ 31946712 (+)
G597566 NA non-coding downstream 26719 31965209 ~ 31997331 (+)
G597629 NA non-coding downstream 74828 32013318 ~ 32013526 (+)
G597632 NA non-coding downstream 83245 32021735 ~ 32021943 (+)
G597646 NA non-coding downstream 94457 32032947 ~ 32033201 (+)
G596297 NA other upstream 855912 31081721 ~ 31082290 (+)
G596168 NA other upstream 1034315 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1905581 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 2409292 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 2574851 29329584 ~ 29503787 (+)
G599004 NA other downstream 1297323 33235813 ~ 33236636 (+)
G599123 NA other downstream 1352036 33290526 ~ 33295528 (+)
G600013 NA other downstream 2027799 33966289 ~ 33966755 (+)
G600431 NA other downstream 2820857 34759347 ~ 34759658 (+)

Expression


Co-expression Network