G597629


Basic Information

Item Value
gene id G597629
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32013318 ~ 32013526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU680918
CCCAATATACTCATCATAGAAACCTGTCTGTGCTTTACTTGGTGCAGAATGTGTTTCACCAAGGTAAAAATAGCCGCACCATCAGTTTGAACGCCAATTACATGGTTTTGTTCAAAAATCCTAGAGACAAACTACAAATTAACACTCTAGCTCAGCAGATGTACCCGGGAAGGAAATCCTACTTTATGGAGAGCTACGAGGACGCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU680918 True 209 lncRNA 0.42 1 32013318 32013526

Neighbor

gene id symbol gene type direction distance location
LOC110531742 LOC106594194 coding upstream 115 32007023 ~ 32013203 (+)
LOC110527653 LOC106582631 coding upstream 297091 31204504 ~ 31716227 (+)
LOC118965379 NA coding upstream 939055 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 940178 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 941700 31052626 ~ 31071618 (+)
LOC110528942 NA coding downstream 183440 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 332122 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 454487 32468013 ~ 32480794 (+)
rbm12 rbm12 coding downstream 467410 32480936 ~ 32492404 (+)
LOC110527660 LOC106565032 coding downstream 475341 32488867 ~ 32519712 (+)
G597566 NA non-coding upstream 15987 31965209 ~ 31997331 (+)
G597555 NA non-coding upstream 66606 31946476 ~ 31946712 (+)
G597554 NA non-coding upstream 74828 31938202 ~ 31938490 (+)
G596899 NA non-coding upstream 228206 31727662 ~ 31785112 (+)
G596883 NA non-coding upstream 320034 31692916 ~ 31693284 (+)
G597632 NA non-coding downstream 8209 32021735 ~ 32021943 (+)
G597646 NA non-coding downstream 19421 32032947 ~ 32033201 (+)
G597793 NA non-coding downstream 328069 32341595 ~ 32352331 (+)
G597798 NA non-coding downstream 398402 32411928 ~ 32412354 (+)
G597794 NA non-coding downstream 399203 32412729 ~ 32413587 (+)
G596297 NA other upstream 931028 31081721 ~ 31082290 (+)
G596168 NA other upstream 1109431 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1980697 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 2484408 29528027 ~ 29528910 (+)
G599004 NA other downstream 1222287 33235813 ~ 33236636 (+)
G599123 NA other downstream 1277000 33290526 ~ 33295528 (+)
G600013 NA other downstream 1952763 33966289 ~ 33966755 (+)
G600431 NA other downstream 2745821 34759347 ~ 34759658 (+)
G600531 NA other downstream 2957602 34971128 ~ 34971405 (+)

Expression


Co-expression Network